Micromonospora tulbaghiae: CSH63_13615
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Entry
CSH63_13615 CDS
T05651
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSH63_13615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtua03019
]
CSH63_13615
03400 DNA repair and recombination proteins [BR:
mtua03400
]
CSH63_13615
Enzymes [BR:
mtua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSH63_13615
Messenger RNA biogenesis [BR:
mtua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSH63_13615
DNA repair and recombination proteins [BR:
mtua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSH63_13615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AYF28468
UniProt:
A0A386WLE1
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All DBs
Position
3028731..3030362
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AA seq
543 aa
AA seq
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MKLTTHSSSLRRAARNLFGWTALRPNQLAAMRAVMKRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERQRPELRAVRISSDESAAQQAEAIEDIRAGRAEFLF
ITPEALSNPDRLAEVRELKPALVAIDEAHCISAWGHDFRPDYLALGHLIDGLGRPPVVAL
TATASPPVRDDIIARLRLREPEVVVSGLDRPNLFLEVAYCPTEDYRWRRLIALLSDDERP
GIIYVPTRRAAEELAERLTGAGYPADFYHGGMPTAARHELHEAFLADRVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGSPARVLLLWRAEDVGLQRYFSGGLPDE
KELTELAAVLRGKARNRKELRELTGLGPRKLGQYLSLLEQIGAAEPRAKQRIGAPRYAPA
AAESGRAALAEAERQQTVTRSRTDMMRAFAETTGCRGQALLAYFGEQMNEVCGHCDNCHA
GTSVAGDGAVGPFPVHSQVRHPEWGAGLVLSYDEDRMTVLFDEVGYKTLSVRVVSEQGLL
ELD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccacgcactcctccagcctgcgccgggcggcgcggaacctgttcggctgg
accgcgctgcggcccaaccagctcgccgccatgcgcgccgtgatgaagcgccgcgacgcc
ctggtggtgctgcccaccggcgccggcaagtcggcgatctaccagatcccggccagcctg
atccccggcccgacggtggtgatctccccgctgctggcgttgcagcaggaccagatcgcc
gcgctcaacgaacggcagcgtccggagctgcgcgcggtgcggatcagctcggacgagagc
gccgcccagcaggccgaggcgatcgaggacatccgcgccgggcgcgcggagttcctgttc
atcacgccggaggcgctgagcaacccggaccggctcgccgaggtccgcgaactgaagccg
gcgctggtggcgatcgacgaggcccactgcatctcggcgtggggccacgacttccggccg
gactacctggcgctcggtcacctgatcgacggcctgggccggccacccgtggtggcgctc
accgcgaccgcctccccgccggtacgcgacgacatcatcgcccggctgcggctgcgcgag
ccggaggtggtggtctccgggctggaccggccgaacctcttcctggaggtggcctactgc
ccgaccgaggactaccggtggcgtcggctgatcgcgctgctgagcgacgacgagcggccc
ggcatcatctacgtgccgacccgccgggcggccgaggagctggccgagcggctcaccggc
gccggttacccggccgacttctaccacggcggcatgcccaccgccgcccggcacgagctg
cacgaggcgttcctggccgaccgggtgccgatcatggtggccacgtcggcgttcggcatg
ggcatcgacaagccgaacatcgcctgggtggtgcacatggcgctgcccgactcgccggac
agctacttccaggagatcggccgggccggacgcgacggctcgccggcccgggtgctgctg
ctgtggcgcgccgaggacgtcggcctccagcgctacttcagcggcggcctgccggacgag
aaggaactgaccgagctcgcggcggtgctgcgcggcaaggcccgcaaccgcaaggagctg
cgcgagctgaccggcctcggcccgcgcaagctggggcagtacctgtccctgctggagcag
atcggggccgccgagccacgcgccaagcagcgcatcggcgcaccccggtacgcgccggcg
gccgccgagtccggccgcgccgcgctggccgaggcggaacggcagcagaccgtgacccgg
tcgcgtaccgacatgatgcgcgcgttcgccgagaccaccggctgccggggccaggccctg
ctggcgtacttcggtgagcagatgaacgaggtctgcgggcactgcgacaactgccacgcc
ggcaccagtgtcgcgggcgacggcgcggtcgggccgttcccggtgcacagccaggtccgc
cacccggagtggggcgccggcctggtgctcagctacgacgaggaccggatgaccgtgctc
ttcgacgaggtgggctacaagacgctgtccgtgcgcgtggtgtccgaacagggcctgctg
gagctggactag
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