Micromonospora tulbaghiae: CSH63_26660
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Entry
CSH63_26660 CDS
T05651
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSH63_26660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtua03400
]
CSH63_26660
Enzymes [BR:
mtua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CSH63_26660
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CSH63_26660
DNA repair and recombination proteins [BR:
mtua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSH63_26660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AYF30962
UniProt:
A0A386WSP6
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All DBs
Position
complement(5727807..5728667)
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPPPSAVAGRAVTGAGRYGKFLD
VRFDEGLHLVVHLARAGWLHYREAFPSATPLRPGKGPIAVRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPAQVPGVAKLGPDALEADLPTFAERLRSRRGQVKGVLTDQAVLAGVGNAYSD
EILHAARLSPFAITDRLTDDQLAGLHAATRTVLGDAVRRSMGQRAAELKGEKRSGLKVHA
RKGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacttccggaggtggaagcgctcgccggttacctgcgcgagcgtgcggtgggc
cgccgcgtcgagcggttcgaggtcgccgcgatcagcgcgctgaagacgtacgatccgccg
ccgagcgcggtcgccggccgtgcggtcaccggcgccggccggtacggcaagttcctggac
gtacggttcgacgagggactgcacctggtggtccacctggcccgggcgggctggctgcac
taccgggaggcgttcccgtcggcgaccccgctgcggcccggcaagggcccgatcgcggtg
cgggtacgcctcgacgacggctccggcttcgacctgaccgaggccggcacccagaagaag
ctggccgcctacctggtcaccgacccggcgcaggtgccgggcgtggcgaagctcgggccg
gacgcgctggaggcggacctgcccacattcgccgagcggctgcgcagccgccggggtcag
gtgaagggtgtgctgaccgaccaggcggtgctcgccggggtggggaacgcgtactcggac
gagatcctgcacgcggcgcggctctcgccgttcgcgatcaccgaccggctcaccgacgac
cagctcgccggtctgcacgcggcgacacgcacggtcctcggcgacgcggtacgccggtcg
atggggcagcgggccgcggagctgaagggcgagaagcgttcgggcctgaaggtgcacgcc
cgcaagggactgccgtgtccggtctgtggcgacaccgtgcgggaggtctcgttcgccgat
tcgagcctccagtactgccccacctgtcagaccggcgggaagccgctggctgaccgaagg
ttgtcccgcctcgtacggtga
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