Micromonospora tulbaghiae: CSH63_31640
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Entry
CSH63_31640 CDS
T05651
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSH63_31640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtua03021
]
CSH63_31640
03019 Messenger RNA biogenesis [BR:
mtua03019
]
CSH63_31640
Transcription machinery [BR:
mtua03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CSH63_31640
Messenger RNA biogenesis [BR:
mtua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSH63_31640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
VWA_2
PIP5K
Motif
Other DBs
NCBI-ProteinID:
AYF31928
UniProt:
A0A386WWR1
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All DBs
Position
6760079..6762181
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AA seq
700 aa
AA seq
DB search
MSDTTDVTSDVSNVAGDATTAAPTRRRRSGTGLSAMLLPELQSLAASLGISGTARMRKGE
LISAITERQQGGAAAGTPRPRAEVAAASAPAREEVHAEVREERAEARPAEQAPAAEVTEG
RTRGRRSRAAAATTEARPAETPAAEARPAETARAEEAPAETGERAERGGDRAERGERNEG
RGRERGERGGDRAERGGERTDRGERAERGERNDRGDRNDRGDRAERGDRAERGDRNERAD
RGERAERNDRNDRGDRGGDRNDRNDRGDRNDRGQRAERDNDGDDDGEGGGRRGRRSRFRD
RRRGRGERGEGDSGGGREPQVGEDDVLVPVAGIIDVLDNYAFVRTTGYLAGPNDVYVSMS
QIKKYGLRRGDAITGAVRAARDGEQRRDKYNPLVRLDTINGMEPDEAKRRPEFYKLTPLY
PQERLRLETEPHILTTRVIDLVMPIGKGQRALIVSPPKAGKTMVLQAIANAITRNNPECH
LMVVLVDERPEEVTDMQRSVKGEVIAATFDRPPQDHTTVAELAIERAKRLVELGHDVVVL
LDSVTRLGRSYNLAAPASGRIMSGGIDSTALYPPKRFLGAARNIENGGSLTILATALVET
GSMADTVIFEEFKGTGNAELKLDRKIADKRVFPAIDINPSGTRKEEVLLAPEELAIIHKL
RKVLHSLDSQAALDLLLDRLKQSRTNIEFLMQIAKSTPGE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcggatgtttccaacgtcgctggcgatgccaccacc
gccgcccccacgcgccgccggcggagcggcaccggtctgtcggcgatgctgctgccggag
ctccagagcctggccgcgtcgctcggcatctctggtaccgctcgcatgcgcaagggcgag
ctgatcagtgccatcaccgagcggcagcagggcggcgccgcggccggaacccctcgaccg
cgtgccgaggtggcggctgcgtccgctcccgcccgtgaggaggtgcacgcggaggtccgt
gaggagcgggccgaggcacgccccgccgagcaggcgccggccgccgaggtgaccgagggc
cgtacccgtggtcgccgcagccgggccgccgccgctaccaccgaggcgcgaccggcggag
acgccggcggccgaggcgcggccggccgagacggcgcgcgccgaggaggcgcccgccgag
accggcgagcgggccgagcgtggcggcgaccgggccgagcgcggtgagcgcaacgagggc
cggggccgtgagcgcggcgagcgcggcggtgaccgtgccgagcgtggcggcgagcggacc
gaccgtggcgagcgggccgagcgcggtgagcgcaacgaccgtggtgaccgcaacgaccgt
ggtgaccgcgccgagcgtggtgaccgggccgagcggggcgaccgcaacgagcgggccgac
cggggcgagcgcgccgagcgcaacgaccgaaacgaccgcggtgaccggggcggcgaccgc
aacgaccgcaacgaccggggtgaccgcaacgaccgtggtcagcgcgccgagcgggacaac
gacggcgacgacgacggcgagggcggcggccggcggggccggcgcagccggttccgggac
cgtcgtcgcggccgcggcgagcggggcgagggcgacagcggtggcggccgcgagccgcag
gtcggcgaggacgacgtgctcgtcccggtcgccggcatcatcgacgtgctcgacaactac
gccttcgtccggaccaccggctacctggcgggcccgaacgacgtgtacgtctcgatgtcc
cagatcaagaagtacggcctgcgccgcggtgacgcgatcaccggcgccgtgcgggccgcg
agggacggcgagcagcggcgcgacaagtacaacccgctggtccggctggacaccatcaac
gggatggagccggacgaggcgaagcgccggccggagttctacaagctcaccccgctctac
ccgcaggagcgcctgcggctggagaccgagccgcacatcctcaccacccgggtgatcgac
ctggtcatgccgatcggcaagggccagcgggcgctcatcgtgtcgccgccgaaggccggc
aagacgatggtgctgcaggcgatcgcgaacgcgatcacccgcaacaacccggagtgccac
ctgatggtggtgctggtggacgagcggccggaagaggtcaccgacatgcagcggtcggtg
aagggcgaggtcatcgcggccacgttcgaccgtccgccgcaggaccacaccaccgtcgcc
gagctggcgatcgagcgggcgaagcgcctggtcgagctggggcacgacgtggtcgtgctg
ctcgactcggtgacccggctcgggcggtcgtacaacctggcggcgccggccagcggccgg
atcatgtcgggtggtatcgactccaccgcgctctacccgcccaagcgcttcctcggcgcg
gcgcgcaacatcgagaacggcggttcgctgaccattctcgccaccgcgctggtggagacc
ggttccatggcggacacggtcatcttcgaggagttcaagggcacgggtaacgccgagctg
aagctggaccggaagatcgccgacaagcgggtcttcccggcgatcgacatcaacccctcc
ggcacccgcaaggaggaggtcctgctcgcgccggaggagctggcgatcatccacaagctc
cgcaaggtgctgcactcgctggactcgcaggcggcgctcgacctcctgctggaccggctc
aagcagtcccgcaccaacatcgagttcctgatgcagatcgcgaagtccactccgggcgag
tga
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