Mycobacterium tuberculosis CAS/NITR204: J113_04745
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Entry
J113_04745 CDS
T02652
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mtuc
Mycobacterium tuberculosis CAS/NITR204
Pathway
mtuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J113_04745 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtuc03021
]
J113_04745 (rpoB)
03400 DNA repair and recombination proteins [BR:
mtuc03400
]
J113_04745 (rpoB)
Enzymes [BR:
mtuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J113_04745 (rpoB)
Transcription machinery [BR:
mtuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J113_04745 (rpoB)
DNA repair and recombination proteins [BR:
mtuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J113_04745 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AGL26149
UniProt:
R4M3B2
LinkDB
All DBs
Position
757448..760963
Genome browser
AA seq
1171 aa
AA seq
DB search
MADSRQSKTAASPSPSRPQSSSNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLIG
SPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVDECKDKD
MTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVY
FDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSE
QIVERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRY
DLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVE
TDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
IKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHVVAQANS
PIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDDANRAL
MGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYITVMHDNGT
RRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCTDDGEMALGKNLLVAIMPW
EGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDE
RGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGK
VIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPF
LADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAKGVPDWAARLPDELLEA
QRTPLCRRRCSTAPRRPSCRACCLTLPNRDGDVLVDADGKAMLFDGRSGEPFPYPVTVGY
MYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQE
LLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEL
REGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
ttggcagattcccgccagagcaaaacagccgctagtcctagtccgagtcgcccgcaaagt
tcctcgaataactccgtacccggagcgccaaaccgggtctccttcgctaagctgcgcgaa
ccacttgaggttccgggactccttgacgtccagaccgattcgttcgagtggctgatcggt
tcgccgcgctggcgcgaatccgccgccgagcggggtgatgtcaacccagtgggtggcctg
gaagaggtgctctacgagctgtctccgatcgaggacttctccgggtcgatgtcgttgtcg
ttctctgaccctcgtttcgacgatgtcaaggcacccgtcgacgagtgcaaagacaaggac
atgacgtacgcggctccactgttcgtcaccgccgagttcatcaacaacaacaccggtgag
atcaagagtcagacggtgttcatgggtgacttcccgatgatgaccgagaagggcacgttc
atcatcaacgggaccgagcgtgtggtggtcagccagctggtgcggtcgcccggggtgtac
ttcgacgagaccattgacaagtccaccgacaagacgctgcacagcgtcaaggtgatcccg
agccgcggcgcgtggctcgagtttgacgtcgacaagcgcgacaccgtcggcgtgcgcatc
gaccgcaaacgccggcaaccggtcaccgtgctgctcaaggcgctgggctggaccagcgag
cagattgtcgagcggttcgggttctccgagatcatgcgatcgacgctggagaaggacaac
accgtcggcaccgacgaggcgctgttggacatctaccgcaagctgcgtccgggcgagccc
ccgaccaaagagtcagcgcagacgctgttggaaaacttgttcttcaaggagaagcgctac
gacctggcccgcgtcggtcgctataaggtcaacaagaagctcgggctgcatgtcggcgag
cccatcacgtcgtcgacgctgaccgaagaagacgtcgtggccaccatcgaatatctggtc
cgcttgcacgagggtcagaccacgatgaccgttccgggcggcgtcgaggtgccggtggaa
accgacgacatcgaccacttcggcaaccgccgcctgcgtacggtcggcgagctgatccaa
aaccagatccgggtcggcatgtcgcggatggagcgggtggtccgggagcggatgaccacc
caggacgtggaggcgatcacaccgcagacgttgatcaacatccggccggtggtcgccgcg
atcaaggagttcttcggcaccagccagctgagccaattcatggaccagaacaacccgctg
tcggggttgacccacaagcgccgactgtcggcgctggggcccggcggtctgtcacgtgag
cgtgccgggctggaggtccgcgacgtgcacccgtcgcactacggccggatgtgcccgatc
gaaacccctgaggggcccaacatcggtctgatcggctcgctgtcggtgtacgcgcgggtc
aacccgttcgggttcatcgaaacgccgtaccgcaaggtggtcgacggcgtggttagcgac
gagatcgtgtacctgaccgccgacgaggaggaccgccacgtggtggcacaggccaattcg
ccgatcgatgcggacggtcgcttcgtcgagccgcgcgtgctggtccgccgcaaggcgggc
gaggtggagtacgtgccctcgtctgaggtggactacatggacgtctcgccccgccagatg
gtgtcggtggccaccgcgatgattcccttcctggagcacgacgacgccaaccgtgccctc
atgggggcaaacatgcagcgccaggcggtgccgctggtccgtagcgaggccccgctggtg
ggcaccgggatggagctgcgcgcggcgatcgacgccggcgacgtcgtcgtcgccgaagaa
agcggcgtcatcgaggaggtgtcggccgactacatcactgtgatgcacgacaacggcacc
cggcgtacctaccggatgcgcaagtttgcccggtccaaccacggcacttgcgccaaccag
tgccccatcgtggacgcgggcgaccgagtcgaggccggtcaggtgatcgccgacggtccc
tgtactgacgacggcgagatggcgctgggcaagaacctgctggtggccatcatgccgtgg
gagggccacaactacgaggacgcgatcatcctgtccaaccgcctggtcgaagaggacgtg
ctcacctcgatccacatcgaggagcatgagatcgatgctcgcgacaccaagctgggtgcg
gaggagatcacccgcgacatcccgaacatctccgacgaggtgctcgccgacctggatgag
cggggcatcgtgcgcatcggtgccgaggttcgcgacggggacatcctggtcggcaaggtc
accccgaagggtgagaccgagctgacgccggaggagcggctgctgcgtgccatcttcggt
gagaaggcccgcgaggtgcgcgacacttcgctgaaggtgccgcacggcgaatccggcaag
gtgatcggcattcgggtgttttcccgcgaggacgaggacgagttgccggccggtgtcaac
gagctggtgcgtgtgtatgtggctcagaaacgcaagatctccgacggggacaagctggcc
ggccggcacggcaacaagggcgtgatcggcaagatcctgccggttgaggacatgccgttc
cttgccgacggcaccccggtggacattattttgaacacccacggcgtgccgcgacggatg
aacatcggccagattttggagacccacctgggttggtgtgcccacagcggctggaaggtc
gacgccgccaagggggttccggactgggccgccaggctgcccgacgaactgctcgaggcg
cagcgaacgccattgtgtcgacgccggtgttcgacggcgcccaggaggccgagctgcagg
gcctgttgtctgacgctgcccaaccgcgacggtgacgtgctggtcgacgccgacggcaag
gccatgctcttcgacgggcgcagcggcgagccgttcccgtacccggtcacggttggctac
atgtacatcatgaagctgcaccacctggtggacgacaagatccacgcccgctccaccggg
ccgtactcgatgatcacccagcagccgctgggcggtaaggcgcagttcggtggccagcgg
ttcggggagatggagtgctgggccatgcaggcctacggtgccgcctacaccctgcaggag
ctgttgaccatcaagtccgatgacaccgtcggccgcgtcaaggtgtacgaggcgatcgtc
aagggtgagaacatcccggagccgggcatccccgagtcgttcaaggtgctgctcaaagaa
ctgcagtcgctgtgcctcaacgtcgaggtgctatcgagtgacggtgcggcgatcgaactg
cgcgaaggtgaggacgaggacctggagcgggccgcggccaacctgggaatcaatctgtcc
cgcaacgaatccgcaagtgtcgaggatcttgcgtaa
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