Mycobacterium tuberculosis Haarlem/NITR202: I917_04760
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Entry
I917_04760 CDS
T02654
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mtuh
Mycobacterium tuberculosis Haarlem/NITR202
Pathway
mtuh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtuh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I917_04760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtuh03021
]
I917_04760
03400 DNA repair and recombination proteins [BR:
mtuh03400
]
I917_04760
Enzymes [BR:
mtuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I917_04760
Transcription machinery [BR:
mtuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I917_04760
DNA repair and recombination proteins [BR:
mtuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I917_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGL22418
UniProt:
R4LZQ5
LinkDB
All DBs
Position
765084..769037
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDEEMRHNELSTLEAEMAVERKAVEDQRDGELEARAQKXEAX
LAELEAEGAKADARRKVRDGGEREMRQIRDRAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELVDRYGEYFTGAMGAESIQKLIENFDIDAEAESLRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRXATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVXGPGNRPLKSLSDLLKGKXGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELXKPFVMKRLXDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVPEDTGEYQ
PASGDHPETGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPVEIEAELFGHSGWQPGX
AWXAETXLGRVMFNELLPLGYPFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDHYEERADKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALREHYPDDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPVKSSF
REGLTVLEYFINTHGARKGXADTALRTADSGYLTRRLVDVSQDVIVREHDCQTERGIVVE
LAERAPDGTLIRDPYIETSAYARTLGTDAVDEAGNVIVERGQDLGDPEIDALLAAGITQV
KVRSVLTCATSTGVCATXYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGXRXLQXXPSFLTTAVRKWSTTR
SPSGSGCGCSSTKTGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLIDRAEFEAENRRVVAEGGE
PAAGRPVLMGITKASLATDSWLXAXXXXXTTRVLTDAAINCRSDKLNGLKENVIIGKLIP
AGTGINRYRNIAVQPTEEARAAAYTIPSYEDQYYSPDFGAATGAAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgcatcggtcttgctaccgcggaggacatc
aggcaatggtcctatggcgaggtcaaaaagccggagacgatcaactaccgcacgcttaag
ccggagaaggacggcctgttctgcgagaagatcttcgggccgactcgcgactgggaatgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagcttgccgcgccc
gtcacccacatctggtacttcaagggtgtgccctcgcggctggggtatctgctggacctg
gccccgaaggacctggagaagatcatctacttcgctgcctacgtgatcacctcggtcgac
gaggagatgcgccacaatgagctctccacgctcgaggccgaaatggcggtggagcgcaag
gccgtcgaagaccagcgcgacggcgaactagaggcccgggcgcaaaagckggaggccgrc
ctggccgagctggaggccgagggcgccaaggccgatgcgcggcgcaaggttcgcgacggc
ggcgagcgcgagatgcgccagatccgtgaccgcgcgcagcgtgagctggaccggttggag
gacatctggagcactttcaccaagctggcgcccaagcagctgatcgtcgacgaaaacctc
taccgcgaactcgtcgaccgctacggcgagtacttcaccggtgccatgggcgcggagtcg
atccagaagctgatcgagaacttcgacatcgacgccgaagccgagtcgctgcgggatgtc
atccgaaacggcaaggggcagaagaagcttcgcgccctcaagcggctgaaggtggttgcg
gcgttccaacagtcgggcaactcgccgatgggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggcggccggktcgccacgtccgacttg
aacgacctgtaccgcagggtgatcaaccgcaacaaccggctgaaaaggctgatcgatctg
ggtgcgccggaaatcatcgtcaacaacgagaagcggatgctgcaggaatccgtggacgcg
ctgttcgacaatggccgccgcggccggcccgtcmccgggccgggcaaccgtccgctcaag
tcgctttccgatctgctcaagggcaagyagggccggttccggcagaacctgctcggcaar
cgtgtcgactactcgggccggtcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcgctggagctgttmaagccgttcgtgatgaagcggctg
gkggacctcaaccatgcgcagaacatcaagagcgccaagcgcatggtggagcgccagcgc
ccccaagtgtgggatgtgctcgaagaggtcatcgccgagcacccggtgttgctgaaccgc
gcacccaccctgcaccggttgggtatccaggccttcgagccaatgctggtggaaggcaag
gccattcagctgcacccgttggtgtgtgaggcgttcaatgccgacttcgacggtgaccag
atggccgtgcacctgcctttgagcgccgaagcgcaggccgaggctcgcattttgatgttg
tcctccaacaacatcctgtcgccggcatctgggcgtccgttggccatgccgcggctggac
atggtgaccgggctgtactacctgaccaccgaggtccccgaggacaccggcgaataccag
ccggccagcggggatcacccggagactggtgtctactcttcgccggccgaagcgatcatg
gcggccgaccgcggtgtcttgagcgtgcgggccaagatcaaggtgcggctgacccagctg
cggccgccggtcgagatcgaggccgagctattcggccacagcggctggcagccgggsgrt
gcgtggrtggccgagaccmcgctgggccgggtgatgttcaacgagctgctgccgctgggt
tatccgttcgtcaacaagcagatgcacaagaaggtgcaggccgccatcatcaacgacctg
gccgagcgttacccgatgatcgtggtcgcccagaccgtcgacaagctcaaggacgccggc
ttctactgggccacccgcagcggcgtgacggtgtcgatggccgacgtgctggtgccgccg
cgcaagaaggagatcctcgaccactacgaggagcgcgcggacaaggtcgaaaagcagttc
cagcgtggcgctttgaaccacgacgagcgcaacgaggcgctggtggagatttggaaggaa
gccaccgacgaggtcggtcaggcgttgcgggagcactaccccgacgacaacccgatcatc
accatcgtcgactccggcgccaccggcaacttcacccagactcgaacgctggccggtatg
aagggcctggtgaccaacccgaagggtgagttcatcccgcgtccggtcaagtcctccttc
cgtgagggcctgaccgtgctggagtacttcatcaacacccacggcgctcgaaagggctkg
gcggacaccgcgttgcgcaccgccgactccggctacctgacccgacgtctggtggacgtg
tcccaggacgtgatcgtgcgcgagcacgactgccagaccgagcgcggcatcgtcgtcgag
ctggccgagcgtgcacccgacggcacgctgatccgcgacccgtacatcgaaacctcggcc
tacgcgcggaccctgggcaccgacgcggtcgacgaggccggcaacgtcatcgtcgagcgt
ggtcaagacctgggcgatccggagattgacgctctgttggctgctggtattacccaggtc
aaggtgcgttcggtgctgacgtgtgccaccagcaccggcgtgtgcgcgacctsctacggg
cgttccatggccaccggcaagctggtcgacatcggtgaagccgtcggcatcgtggccgcc
cagtccatcggcgaacccggcacccagctgaccatgcgcaccttccaccagggtggcgtc
ggtgaggacatcaccggtggtctgccccgggtgcaggagctgttcgaggcccgggtaccg
cgtggcaaggcgccgatcgccgacgtcaccggccgggttcggctcgaggacggcgrgcgg
gktctwcaaraatmaccatcgttcctgacgacggcggtgaggaagtggtctacgacaaga
tctccaagcggcagcggctgcgggtgttcaagcacgaagacgggttcsgaacgggtgctc
tccgatggcgaccacgtcgaggtgggccagcagctgatggaaggctcggccgacccgcat
gaggtgctgcgggtgcagggcccccgcgaggtgcagatacacctggttcgcgaggtccag
gaggtctaccgcgcccaaggtgtgtcgatccacgacaagcacatcgaggtgatcgttcgc
cagatgctgcgccgggtgaccatcatcgactcgggctcgacggagtttttgcctggctcg
ctgatcgaccgcgcggagttcgaggcagagaaccgccgagtggtggccgagggcggtgag
cccgcggccggccgtccggtgctgatgggcatcacgaaggcgtcgctggccaccgactcg
tggctgkcggcggsgkcgktccmggrgaccactcgcgtgctgaccgatgcggcgatcaac
tgccgcagcgataagctcaacggtctgaaggaaaacgtgatcatcggcaagctgatcccg
gccggtaccggtatcaaccgctaccgcaacatcgcggtgcagcccaccgaggaggcccgc
gctgcggcgtacaccatcccgtcgtatgaggatcagtactacagcccggacttcggtgcg
gccaccggtgctgccgtcccgctggacgactacggctacagcgactaccgctag
DBGET
integrated database retrieval system
