Mycobacterium tuberculosis Haarlem/NITR202: I917_18570
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Entry
I917_18570 CDS
T02654
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mtuh
Mycobacterium tuberculosis Haarlem/NITR202
Brite
KEGG Orthology (KO) [BR:
mtuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtuh03016
]
I917_18570
Enzymes [BR:
mtuh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
I917_18570
Transfer RNA biogenesis [BR:
mtuh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
I917_18570
Prokaryotic type
tRNA splicing ligases
I917_18570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGL24222
UniProt:
R4M9N7
LinkDB
All DBs
Position
2954493..2955794
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AA seq
433 aa
AA seq
DB search
MQVVNVATLPGIVRASYAMPDVHWGYGFPIGGVAATDVDNDGVVSPGGVGFDISCGVRLL
VGEGLDREELQPRLPAVMDRLDRAIPRGVGTAGXWRLPDRNTLQEVLTGGARFAVEQGHG
VALDLERCEDGGVMTGADAAKISDRALQRGLGQIGSLGSGNXFLEVQAVDRVYDPVAAAP
MGLAEGTVCVXIHTGXRXLGHQICTDHVRQMEQAMGRYGIAVPDRQLACVPVHSPDGQAY
LAAMAAAANYGRANRQLLTEAXASCVQXXATGTPLDLLYDVSHNLAKIETHPIDGQLRSV
CVHRKGATRSLPPHHHELPAELAAXGQPVLIPGTMGTASYVLAGVTGNPAFFSTAHGAGR
VLSRHQAARHTSGEAIRASLAKRGIIVRGTSRRDIAEEKPEAYKDVDEVIEASHQSGLAR
KVAXXVXLGCVKG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggtcaacgtggctacgctgccggggattgtccgggcctcgtatgcgatgccc
gatgtgcactggggatatggtttcccaatcggcggcgtggccgcaaccgacgtcgacaat
gatggagtcgtttccccaggcggtgtcggcttcgatatttcgtgcggcgtaagactcttg
gtcggcgaagggctggaccgcgaggagctgcaaccacggttgccggcggtcatggaccgg
cttgatcgcgcgataccgcgcggagtgggcacggcgggkgkgtggcgactacccgaccgg
aacacgctgcaggaggtgctcaccggtggtgcccggtttgcggtggaacaggggcatggc
gtcgcgctagacctcgagcggtgcgaagacggcggtgtgatgacaggagcggacgcggcc
aaaatcagtgaccgggccctccaacgcgggcttgggcagatcggcagccttggctcgggc
aaccmcttcctggaagtccaggccgtggaccgcgtctacgatccggttgcggccgcgccg
atgggtctggcggaagggaccgtctgcgtgaysatccacaccggckcacgggkcctgggc
catcagatctgcacggatcacgtccgccagatggaacaagccatgggccgatacggaatc
gcggtgcccgatcgccaattggcttgtgtgccggtgcactcccccgatgggcaggcctat
ctcgccgcgatggcggcggcggccaactacggacgcgccaaccgccaactgctgaccgag
gctgmcgcgtcgtgtgttcagcwgwtggcaaccggaacacctctggacctgctctacgac
gtgtcgcacaacctggccaagatcgagacgcatccgatcgacggtcagctgcgctcggtg
tgcgtgcaccgcaagggcgccacccgctcgctgccgccgcaccatcacgagctgccggcc
gaactggcagcggkcggccaacccgtgctgatacccgggacgatgggtacggcgtcatat
gtgcttgccggggtcaccggcaacccggcgttcttttccaccgcgcatggtgctgggcgg
gtactgagccgtcaccaggccgcccgccacaccagcggtgaagcgatacgcgccagcctc
gcaaaacgtggcatcatcgtccgcggtacctctcgtagggatatcgccgaggaaaagccg
gaggcctacaaagacgtcgacgaggtcatcgaagccagccatcagagtggcctcgcgcgc
aaagtggctcsccytgttyccttgggctgtgtcaaaggatga
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