Mycobacterium tuberculosis Haarlem: TBHG_01302
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Entry
TBHG_01302 CDS
T02845
Name
(GenBank) bifunctional regulatory protein and DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mtul
Mycobacterium tuberculosis Haarlem
Pathway
mtul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TBHG_01302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtul03000
]
TBHG_01302
03400 DNA repair and recombination proteins [BR:
mtul03400
]
TBHG_01302
Enzymes [BR:
mtul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TBHG_01302
Transcription factors [BR:
mtul03000
]
Prokaryotic type
Helix-turn-helix
AraC family
TBHG_01302
DNA repair and recombination proteins [BR:
mtul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TBHG_01302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
EBA41773
LinkDB
All DBs
Position
complement(1482688..1484178)
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AA seq
496 aa
AA seq
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MHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE
GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL
LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT
ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR
LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR
AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT
FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP
WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT
TLEHPVNQWPPQEKIA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgacgacttcgaacgctgctaccgggcgatccagtccaaagacgcccggttcgac
ggctggttcgtcgtcgcggttttgaccaccggtgtctactgccggccgagttgccccgtc
cggccaccgttcgcgcgcaatgtccggttcctgccgactgcggcggccgctcagggggag
ggattccgggcctgcaaacggtgccgccccgacgcctcgcctgggtctccggaatggaat
gtgcgtagtgacgtcgtggcgcgggcgatgcggctgattgccgacggaacggtggaccgc
gacggtgtcagcggcctcgcggcccagctcggttacaccattcgccagctggagcggctg
ttgcaggccgtggtcggcgccggtccgctcgcgttggcccgcgcccaacgcatgcagacc
gcccgggtgctgatcgagaccacgaacctgccgttcggcgatgtcgcattcgccgccggg
ttttccagcatccgtcagttcaacgacaccgttcgcctggcgtgcgacggcacaccgacg
gcattgcgtgcgcgcgcggccgcccgattcgagtctgccaccgcatcagcgggcacggtg
tcgctgcggctacccgtccgtgcaccattcgccttcgagggtgttttcggccatctggcc
gccaccgcggtgccgggttgcgaagaggtccgcgatggtgcgtaccgacgcacgctacgg
ctcccatggggcaacggcatcgtcagcctgacgccggcacccgatcatgtgcgctgcctg
cttgtgctcgatgatttccgcgacctgatgacggccactgcacgttgccgacggctgctg
gacctcgacgccgatcccgaagcgatcgtcgaggcgctgggcgccgatccggatctgcgc
gcagtggtgggcaaggcacccgggcaacgcattccccgcacagtcgacgaggcagaattc
gccgtgcgggcggtcctcgcccaacaggtatcgacgaaggccgcaagcactcacgcgggc
cgactggtcgccgcctacggacggccggtccacgatcgccacggcgctttgacccacacc
ttcccgtcgatcgagcagctcgctgagatcgatcccggccatctggccgtccccaaggcg
cgtcaaaggaccataaacgcgctcgtcgccagccttgccgacaaaagtctggtcctggac
gccggatgtgactggcaacgcgcccgcgggcagttgctagcgctgcccggagtgggcccc
tggaccgcggaggtcatcgccatgcgcggcctcggtgacccggacgcctttccggccagt
gatctcggcctgcggctggccgccaaaaagctgggcctgcctgcacaacgacgagccctg
acggtgcacagcgctcgctggcgcccctggcgctcctatgccacccagcacctgtggacc
accctggaacatccggtaaaccaatggccaccgcaggagaagatcgcatga
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