Methylocella tundrae: MTUNDRAET4_0017
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Entry
MTUNDRAET4_0017 CDS
T05970
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ (fragment)
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtun
Methylocella tundrae
Pathway
mtun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTUNDRAET4_0017 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtun03019
]
MTUNDRAET4_0017 (recQ)
03400 DNA repair and recombination proteins [BR:
mtun03400
]
MTUNDRAET4_0017 (recQ)
Enzymes [BR:
mtun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTUNDRAET4_0017 (recQ)
Messenger RNA biogenesis [BR:
mtun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTUNDRAET4_0017 (recQ)
DNA repair and recombination proteins [BR:
mtun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTUNDRAET4_0017 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
Helicase_C
RecQ_Zn_bind
DEAD
HHH
AMP_N
Motif
Other DBs
NCBI-ProteinID:
VFU06910
UniProt:
A0A4U8YUF9
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All DBs
Position
1:13737..15281
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AA seq
514 aa
AA seq
DB search
MFMSRLNAWCAATRRALLREAGANVLAIDEAHCVSQWGHDFRPEYSDLAQVAKSIGDMQL
IAVTATADAPTRDDIVQKLFPAKPRVFVRSFDRPNIHLAMQRKANVAHQIETMIARHKGQ
SGIVYCASRKGVEKLSETLSAKGVAALPYHAGLASEIRSAHQDEFLRCDGVVIVATIAFG
MGIDKPNVRFVCHADLPQSIEAYYQEIGRAGRDGLPSDTLTLFGEADVRLRERQISESDS
PPERKRLERRKLNGLLALCETPRCRRQTLLAAFGEASEPCGNCDVCEGKWPFFNGVVAAQ
KVMSAIHRTSGRFFSSHLANLLIGNATAAITRHGHDRLPTFGVGKEFKPGEWRSIFHQLH
AADLIAQDSCDRDRWIVTPAGREVLIGEAPLNLRAGTDLPDAVAVRRALRQIESAADADA
TLERSAFSARPRDAGLTATQNHLLAALKAKRLEIARRQKQAPFVIFHDSVLIGIAMARPR
TKDELKLVHGVGPAKLERYGAIFLAIVADHDDAL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgtttatgtcgcgcctgaacgcctggtgcgcggcgacacgcagggccctgctgcgcgaa
gccggagccaatgttctcgccatcgacgaagcgcattgcgtgtcgcaatggggccacgac
ttccggccggaatattccgatctcgcgcaggtcgcgaaatcgataggagacatgcagctc
atcgctgtcactgcgacggccgatgcgccgacccgcgacgacatcgtgcaaaagctgttt
ccggccaagcctcgcgtctttgtgcgttctttcgaccggccgaacatccatctcgccatg
cagcgcaaagccaatgtcgcgcatcagatcgagacgatgatcgcgcgccacaagggacaa
agcggcatcgtctattgcgcctcccgcaaaggcgttgaaaagctcagcgaaacgttgagc
gcgaagggcgttgcggcgctgccctatcacgcggggcttgcatccgagattcgctcggct
catcaggatgaattcttgcgctgtgacggcgtcgtgatcgtcgcgacgattgcttttggc
atgggcatcgacaagccgaatgtgcgctttgtctgccatgccgatctgccgcaaagcatc
gaagcctactatcaggagatcggccgcgccggccgcgacggtctgccctccgacacgttg
acgctgttcggcgaggccgacgtcaggctgcgcgagcggcaaatttctgaaagcgattcg
ccgcctgagagaaagcgcctcgaacggcgtaaactcaacgggctcctcgcgctctgcgag
acgccgcgctgccgccgccagaccttgctcgcggctttcggggaagcctccgaaccttgc
ggcaattgcgatgtctgcgagggcaaatggcccttcttcaacggcgtcgtcgccgcccag
aaagtgatgtcggcgatccatcggacttcggggcggttcttctccagccatctcgccaat
ctgctcatcggcaacgccacggcggcgattacccggcatggccatgaccgcctgccgacc
tttggcgtcggcaaggagttcaagccaggcgaatggcgcagcattttccatcagctgcac
gcggccgatctgatcgcgcaggattcttgcgatcgcgaccgctggatcgtcacgccggcc
gggcgcgaggttctgatcggcgaagcgccgcttaatctgcgcgccgggacggatttgccg
gacgcagtcgcagtccggcgggcgttgcggcagatcgagagcgcggctgacgcggatgcg
acgctcgagcggagcgcgttttctgcgcggccgcgcgacgccggtctgacggcgacgcag
aatcatctcttggcggcgctgaaagcaaaacgtctcgaaatcgccaggaggcagaagcag
gcgcctttcgtcatctttcatgacagcgttctgatcggcatcgccatggcgcgcccgcgc
acgaaagacgaattgaagctcgttcacggcgtcggcccagccaaactcgaacgctatggc
gcgatctttttggccattgtcgcagaccatgatgacgcactgtga
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