Methylocella tundrae: MTUNDRAET4_0141.1
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Entry
MTUNDRAET4_0141.1 CDS
T05970
Symbol
GroEL
Name
(GenBank) 60 kDa chaperonin 4 (fragment)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mtun
Methylocella tundrae
Pathway
mtun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTUNDRAET4_0141.1 (GroEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtun03019
]
MTUNDRAET4_0141.1 (GroEL)
03110 Chaperones and folding catalysts [BR:
mtun03110
]
MTUNDRAET4_0141.1 (GroEL)
03029 Mitochondrial biogenesis [BR:
mtun03029
]
MTUNDRAET4_0141.1 (GroEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtun04147
]
MTUNDRAET4_0141.1 (GroEL)
Enzymes [BR:
mtun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MTUNDRAET4_0141.1 (GroEL)
Messenger RNA biogenesis [BR:
mtun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MTUNDRAET4_0141.1 (GroEL)
Chaperones and folding catalysts [BR:
mtun03110
]
Heat shock proteins
HSP60 / Chaperonin
MTUNDRAET4_0141.1 (GroEL)
Mitochondrial biogenesis [BR:
mtun03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MTUNDRAET4_0141.1 (GroEL)
Exosome [BR:
mtun04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MTUNDRAET4_0141.1 (GroEL)
Exosomal proteins of other body fluids (saliva and urine)
MTUNDRAET4_0141.1 (GroEL)
Exosomal proteins of breast cancer cells
MTUNDRAET4_0141.1 (GroEL)
Exosomal proteins of colorectal cancer cells
MTUNDRAET4_0141.1 (GroEL)
Exosomal proteins of bladder cancer cells
MTUNDRAET4_0141.1 (GroEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5753
Motif
Other DBs
NCBI-ProteinID:
VFU16486
UniProt:
A0A4U8Z6Q5
LinkDB
All DBs
Position
p2:complement(107585..108748)
Genome browser
AA seq
387 aa
AA seq
DB search
MAKALEAVGPDGIITLDQGSAVEDVIEVIEGFSFDRGYVSHHMITDVPTMRAVLDDAYIL
LTDQKILRFEQIQHLVEAIEAKDASLLIIAEEVDPKALIGLLASRSRGRGRFVVVNPPDF
GHWRRQMMEDIGVLTGGEVIFGDLGYALERTSLENLGRAECVVVSQFETMILRGRGSPEA
VEARRAQIRQQIDLAPQNIERDKLDERMSKMTSGTVRILAGGVTPAERRRRLQLLDDALC
SGRAALLDGVVAGGGTTLLELAATIRPKGNGAANEGAAIGVALFRSAMQRPLAQIAENAG
RDPEATIAAVAKAPGGVGFDARTGQLADMFEAGVIDPVRVTIASVRNAVSSAKLILGTNT
LIVDRGDYVDPTTGPARGGGGELLGRA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaggcgctggaagcggtcgggccggacggcattatcacgctcgatcaaggctcc
gcggtcgaggatgtgatcgaagtcatcgaaggattttcattcgatcgcggctatgtctcg
catcacatgatcactgacgttccgacgatgcgggcggtgcttgacgacgcctatattctc
ttgaccgatcagaagattcttcggtttgagcagatccagcatctcgtcgaagcgatcgag
gcgaaggacgcgagcctgctcattatcgccgaagaggtcgatccaaaggcccttatcggc
ctgctggcgagccgctccagaggacgtgggcgtttcgtcgtcgtcaacccgccggacttt
ggtcattggcgcaggcagatgatggaggatatcggcgtcctgaccggaggcgaagtcatc
ttcggcgatctcggctatgctctggagcgtacgagcctcgaaaatctggggcgcgccgaa
tgcgttgtcgtgtcgcaattcgagacaatgattttgcgaggacgcggctcgcccgaagcg
gtcgaggcccggcgcgcgcagatccgtcagcagatcgacctggcgccgcaaaacatcgaa
cgcgacaagctcgatgaacgcatgtccaaaatgacctccggaaccgtgcggatcctcgcc
gggggcgtgacgccagcggagcgccggcgacgtctgcagcttcttgacgacgctttgtgc
tcagggcgggcggcgctcctcgatggagtggtcgcaggaggcggaacgacgctgctcgaa
ctggccgccacgataaggccaaaaggcaatggcgcggccaatgaaggcgccgccataggc
gtcgctcttttccgttccgcgatgcagcggcccctcgctcaaatcgccgaaaacgcggga
cgcgatcccgaggccaccatcgccgcggtggcgaaggcgcccggcggcgtcggtttcgac
gcgaggaccgggcaattggccgacatgttcgaagctggcgtcatcgatccggtccgcgtg
acaatcgcctccgtccgtaatgcggtgtcctccgccaaactcattttgggaaccaatacg
ctgatcgttgatcgcggcgactacgtcgatccgaccaccggtccagcgcgcggcggtggt
ggagaactgctcggccgcgcctga
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