Methylocella tundrae: MTUNDRAET4_1182
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Entry
MTUNDRAET4_1182 CDS
T05970
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mtun
Methylocella tundrae
Pathway
mtun03420
Nucleotide excision repair
mtun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTUNDRAET4_1182
03430 Mismatch repair
MTUNDRAET4_1182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtun03400
]
MTUNDRAET4_1182
Enzymes [BR:
mtun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTUNDRAET4_1182
DNA repair and recombination proteins [BR:
mtun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTUNDRAET4_1182
MMR (mismatch excision repair)
Other MMR factors
MTUNDRAET4_1182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VFU08075
UniProt:
A0A4U8YW52
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All DBs
Position
1:complement(1015730..1018138)
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AA seq
802 aa
AA seq
DB search
MIDPFSLADMEAPAPQPGGIAARARAAASGGQRYLDGLNGEQRAAVEAVDGPVLVLAGAG
TGKTRVLTTRIAHIIAQGRAKAQDILAVTFTNKAAREMRDRVAMLAGPVAESMPWLGTFH
AISTKILRRHAELVGLKSSFTILDSDDQIRLLKQVLQAENIDDKRWPARALAYQIDAWKN
RGLDPAHVPPGEAGVFANGKGAQLYALYQERLKILNAADFGDLLLECLRLLRENPDVLKQ
YQDRFRYMLVDEYQDTNTIQYLWLRLLAQGRHNICCVGDDDQSIYGWRGAEVDNILRFEK
DFPGAKVIRLERNYRSTGHILAVAAGLIAHNEGRLGKTLFTDDEAGEKPSVCGVWDSEEE
ARGVGEEIEQLARKGHAYDEFAILVRASFQMREFEERFITLGLPYRVIGGPRFYERAEIR
DALAYLRCVAQPADDLAFERIFNVPRRGLGDATLQLLHEYARGQRLPLIQAAQYMVETDE
IKPKQRQVLRDLLTSFSRWASLIDQKPQGELIEMILEESGYTDMWRKDRTAEAAGRLENL
KELVRAMEEFPDLGAFLEHISLVMEAEMKDAGPRVSIMTLHAAKGLEFETVFLPGWEEGL
FPHQRSLDESGRAGLEEERRLAYVGVTRARRRAKIYFATNRRIHGLWQTTLPSRFLDELP
ADHVEVVEAATGSAYGGYAQSRFANMDSYGSSYETPGWRRAQRRNEETRQGQGAAKSSGF
GRPAAQRGPLQIEGELVAKSSAQSGYSKGARVFHQKIRLWRGGGGRRQQADGRFRQGGPQ
NGFGEFCAGRVSALNSVELIHN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatccattttccctcgccgacatggaagcgccagcgccgcagcctggcggcatc
gcggcgcgcgcccgggcggcggcgtccggcggccagcgctatctcgacgggctgaacggc
gagcagcgggcggctgtcgaggcggtcgacggtcccgttctcgttttggcaggcgcgggg
accggaaaaacgcgcgtcctcaccacgagaatcgcccacattatcgctcaaggccgcgcg
aaagcgcaggatattctcgctgtcaccttcaccaacaaggcggcgcgggagatgagggac
cgcgtcgccatgctggcgggccccgtcgccgagagcatgccgtggcttggcaccttccac
gcgatctcgaccaaaatcctgcgtcgtcacgccgaactcgtcgggctgaaatccagcttc
acaattctcgactcggacgatcagatccgcctcctgaaacaagtgttgcaggccgaaaat
atcgatgacaaacgctggccggcgcgcgcgctcgcctatcagatcgacgcctggaaaaac
cgcggccttgatcccgcgcatgtgccgccgggcgaggcgggagttttcgccaatggcaag
ggcgcgcagctttatgcgctgtatcaggagcggctgaaaatcctcaacgccgccgatttc
ggcgatctgctgctcgaatgcctgcgccttttgcgcgaaaatccggacgtcctgaagcaa
tatcaggaccggttcagatatatgctcgtcgacgaatatcaggacacaaacacaatacaa
tatctttggctgcgtctgctggcgcaggggcgtcacaatatttgctgcgttggcgatgac
gatcaatccatctacggctggcgcggggcggaagtcgacaatattttgcggtttgaaaag
gattttccgggggccaaggttattcgcctagagcgcaattatcgttcaaccgggcatatc
ctcgccgtcgcggccggcctcatcgcccataatgaaggacgtctcggcaagacccttttc
accgacgatgaagctggcgaaaagccgagcgtttgcggcgtctgggactcggaggaagaa
gcgcgcggcgtcggcgaagagatcgagcagctggcgcgcaaaggccatgcttacgacgaa
ttcgcgatccttgtccgcgcctcgttccagatgcgcgagttcgaggagcgcttcatcact
ttgggcctgccttaccgggtcatcggcggtccgcgcttttatgagcgcgccgaaatccgc
gacgcgctcgcctatctgcgctgcgtcgcccagccggccgacgatctcgcctttgagcgc
atcttcaatgtgccgcgacgcggtcttggcgacgccaccttgcagctcctgcacgaatat
gcccgcggccaacgcctgccgctgatacaggcggcgcaatatatggtcgagacagatgaa
ataaagccgaagcagcggcaggttctgcgcgacttgctgacgagcttttcccgttgggcg
agcctcatcgatcaaaagccgcaaggcgagctgatcgagatgatattggaggagtccggc
tacaccgatatgtggcgcaaggaccgcacagcggaggctgccgggcgcctcgaaaacctg
aaagagctcgtgcgcgccatggaggagtttccggaccttggcgcctttcttgagcatatc
tcgctggtcatggaggccgagatgaaggacgctggtccgcgcgtttcgatcatgacgctt
cacgcggcgaaaggcctcgaattcgagacggtctttctgcccggctgggaggaggggctg
tttccgcatcagcgttcgctcgatgaatcggggcgcgcgggcctcgaggaagagcgccgc
ctcgcctatgtcggcgttacccgcgcgcggcggcgggcgaaaatctatttcgccaccaac
cgccgcatccacgggctttggcagacgacgcttccctctcgctttctcgatgagcttcca
gccgatcatgtcgaggtcgtcgaagcggccaccggctccgcctatggcggctacgcgcaa
tcgcgcttcgcgaatatggacagctacggctcctcttatgaaacgccgggctggcggcgc
gcgcagcgtcgcaacgaagagacgaggcaaggacagggcgcggcgaaatcgagcggattt
gggcggccggccgcccagcgcggaccgctccagatcgagggcgaactcgtcgcgaaatcc
agcgcccaatcaggctattccaaaggcgcgcgggtatttcaccaaaaaattcggctatgg
cgcggtggcggcggtcgacggcaacaagctgacggtcgatttcgacaaggcgggccgcaa
aatggttttggagagttttgtgcaggccgggtaagcgcattgaactccgtggaacttatc
cacaattaa
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