Methylocella tundrae: MTUNDRAET4_2868
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Entry
MTUNDRAET4_2868 CDS
T05970
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mtun
Methylocella tundrae
Pathway
mtun00300
Lysine biosynthesis
mtun00470
D-Amino acid metabolism
mtun01100
Metabolic pathways
mtun01110
Biosynthesis of secondary metabolites
mtun01120
Microbial metabolism in diverse environments
mtun01230
Biosynthesis of amino acids
Module
mtun_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MTUNDRAET4_2868 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MTUNDRAET4_2868 (dapF)
Enzymes [BR:
mtun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MTUNDRAET4_2868 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
VFU09755
UniProt:
A0A4U8Z319
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All DBs
Position
1:2608016..2608888
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AA seq
290 aa
AA seq
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MSPLANRLVTKMNGLGNEILVVDLRGAGFGVSAPEARAIARSKGLAFDQLMALSDPRSEG
AEAYVTILNADGSEAGACGNGARCVAWTLFRDDTRDEIFIETAAGRLACRRLGEWRFEVE
MGAPRLAWADIPLAKPAEDTTAIDLAFGPPGAPLLQNPSVVSMGNPHAIFFVENFATYDL
AVIGPALEHDPIFPERANISLARIVSRDHIELKVWERGAGLTRACGSAACAALVAAARKN
LTGRRATVSLPGGDLDIVWRESDDMVVMAGPVEFEFETELDPGLFADAAA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctctcgccaaccggctggtaaccaagatgaacggcctcggcaacgagatcctc
gtcgtcgacctgcgcggcgcgggctttggagtcagcgcgcccgaagcgcgggcgattgcg
cgaagcaaggggcttgccttcgatcagctgatggcgctcagtgacccgcgctcggagggt
gctgaggcctatgtcacgattctcaacgccgatggctccgaggcaggcgcctgcggcaac
ggcgcccgctgcgtcgcctggaccctctttcgcgatgacacgcgtgacgaaattttcata
gaaacggcggcgggccgtctcgcctgccggcgtctcggtgaatggcgttttgaagtcgag
atgggcgcgcctcgcctcgcctgggccgatattccgctggcgaaacccgctgaggacacg
accgcgatcgacctcgcctttggtccgcccggcgcgccgctcctgcaaaatccttctgtc
gtcagcatgggcaatccgcacgcgattttctttgtcgagaattttgcgacctatgatctc
gccgtcattggccccgcgctggaacatgatccgatcttcccggagcgggccaatatttcg
ctcgcccgaatcgtctcccgcgatcatatcgaactcaaggtctgggaacgcggcgccggc
ctcacccgcgcctgcggctccgccgcctgcgcagcgctcgtcgccgccgcgcgcaaaaat
ttgacagggcggcgggcgaccgtctccttgccgggcggcgatctcgatattgtctggcgc
gagagcgacgatatggtggtgatggcgggccccgtcgagttcgaatttgaaaccgagctc
gatcccgggcttttcgcggacgccgcggcgtga
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