KEGG   Methylocella tundrae: MTUNDRAET4_2868
Entry
MTUNDRAET4_2868   CDS       T05970                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mtun  Methylocella tundrae
Pathway
mtun00300  Lysine biosynthesis
mtun00470  D-Amino acid metabolism
mtun01100  Metabolic pathways
mtun01110  Biosynthesis of secondary metabolites
mtun01120  Microbial metabolism in diverse environments
mtun01230  Biosynthesis of amino acids
Module
mtun_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mtun00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MTUNDRAET4_2868 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MTUNDRAET4_2868 (dapF)
Enzymes [BR:mtun01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MTUNDRAET4_2868 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: VFU09755
UniProt: A0A4U8Z319
LinkDB
Position
1:2608016..2608888
AA seq 290 aa
MSPLANRLVTKMNGLGNEILVVDLRGAGFGVSAPEARAIARSKGLAFDQLMALSDPRSEG
AEAYVTILNADGSEAGACGNGARCVAWTLFRDDTRDEIFIETAAGRLACRRLGEWRFEVE
MGAPRLAWADIPLAKPAEDTTAIDLAFGPPGAPLLQNPSVVSMGNPHAIFFVENFATYDL
AVIGPALEHDPIFPERANISLARIVSRDHIELKVWERGAGLTRACGSAACAALVAAARKN
LTGRRATVSLPGGDLDIVWRESDDMVVMAGPVEFEFETELDPGLFADAAA
NT seq 873 nt   +upstreamnt  +downstreamnt
atgagtcctctcgccaaccggctggtaaccaagatgaacggcctcggcaacgagatcctc
gtcgtcgacctgcgcggcgcgggctttggagtcagcgcgcccgaagcgcgggcgattgcg
cgaagcaaggggcttgccttcgatcagctgatggcgctcagtgacccgcgctcggagggt
gctgaggcctatgtcacgattctcaacgccgatggctccgaggcaggcgcctgcggcaac
ggcgcccgctgcgtcgcctggaccctctttcgcgatgacacgcgtgacgaaattttcata
gaaacggcggcgggccgtctcgcctgccggcgtctcggtgaatggcgttttgaagtcgag
atgggcgcgcctcgcctcgcctgggccgatattccgctggcgaaacccgctgaggacacg
accgcgatcgacctcgcctttggtccgcccggcgcgccgctcctgcaaaatccttctgtc
gtcagcatgggcaatccgcacgcgattttctttgtcgagaattttgcgacctatgatctc
gccgtcattggccccgcgctggaacatgatccgatcttcccggagcgggccaatatttcg
ctcgcccgaatcgtctcccgcgatcatatcgaactcaaggtctgggaacgcggcgccggc
ctcacccgcgcctgcggctccgccgcctgcgcagcgctcgtcgccgccgcgcgcaaaaat
ttgacagggcggcgggcgaccgtctccttgccgggcggcgatctcgatattgtctggcgc
gagagcgacgatatggtggtgatggcgggccccgtcgagttcgaatttgaaaccgagctc
gatcccgggcttttcgcggacgccgcggcgtga

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