Methylocella tundrae: MTUNDRAET4_3130
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Entry
MTUNDRAET4_3130 CDS
T05970
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mtun
Methylocella tundrae
Pathway
mtun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTUNDRAET4_3130 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtun03021
]
MTUNDRAET4_3130 (rpoA)
03400 DNA repair and recombination proteins [BR:
mtun03400
]
MTUNDRAET4_3130 (rpoA)
Enzymes [BR:
mtun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTUNDRAET4_3130 (rpoA)
Transcription machinery [BR:
mtun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MTUNDRAET4_3130 (rpoA)
DNA repair and recombination proteins [BR:
mtun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MTUNDRAET4_3130 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
VFU10017
UniProt:
A0A4U8Z3J2
LinkDB
All DBs
Position
1:2853170..2854186
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AA seq
338 aa
AA seq
DB search
MIQRNWQELTKPNKLEVISGDDPKRFATIVAGPLELGFGLTLGNSLRRILLSSLQGAAIT
SVHIDGVLHEFSSIPGVREDVTDIVLNIKDIAIKMPGEGPKRIVLKKQGPGKVTAGDIQT
TGDISILNPGLVICTLDEGAEIRMEFTVNTGKGYVAADRNRAEDAPIGLIPIDSLYSPVK
KVSYRVENTREGQNLDLDKLTLQVETNGALTPEDAVAFAARILQDQLNVFVNFEEPRRVE
LTPSIPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVTGWPPDNIDELAKRFEEHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccaaagaaactggcaagagctcaccaaaccgaacaaactcgaagtcatctcaggc
gatgatccgaagcgttttgcgaccatcgtcgcgggaccgcttgagcttggctttggcctc
accctcggcaattcgctgcgccggattctgttgtcgtcgctccagggcgccgcgatcacc
tccgtgcatatcgacggcgtcctgcacgaattctcgtcgatccccggcgtgcgcgaggac
gtgaccgacatcgtcctcaacatcaaggacattgcgatcaaaatgccgggcgaaggcccg
aagcgcatcgtcctgaaaaagcagggccccggcaaagtcaccgccggagacatccagacc
acgggcgacatttccatcctcaatcccggccttgtcatctgcacgctcgatgagggcgcc
gagatccgcatggaattcacggtcaacaccggcaaaggctatgtcgccgcggaccgcaac
cgcgccgaagacgccccgatcggcctcattccgatcgacagcctctattcgccggtgaaa
aaggtcagctatcgcgtcgaaaacacccgcgaaggtcagaaccttgacctcgacaagctg
acgctgcaggtcgaaaccaatggcgccctgacgcccgaggacgcggtcgctttcgccgcg
cgcattctgcaggatcagctgaatgtcttcgtcaacttcgaggagccgcgccgcgtcgag
cttacgccgtcgattccggaactcgcctttaacccggctctgctcaagaaggtcgacgaa
ctcgaattgtcggtgcgctcggccaactgcctgaagaacgacaatatcgtctatattggc
gatctcattcaaaagagcgaaggcgaaatgcttcgcacgccgaacttcggccgcaagtct
ttgaacgaaatcaaagaggttctcgctcagatgggcctgcatcttggcatggaagtcacc
ggctggccgccggacaatatcgacgaactcgccaagcgctttgaagaacattattga
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