Methylocella tundrae: MTUNDRAET4_3392
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Entry
MTUNDRAET4_3392 CDS
T05970
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mtun
Methylocella tundrae
Pathway
mtun03410
Base excision repair
mtun03430
Mismatch repair
mtun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTUNDRAET4_3392 (recJ)
03430 Mismatch repair
MTUNDRAET4_3392 (recJ)
03440 Homologous recombination
MTUNDRAET4_3392 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtun03400
]
MTUNDRAET4_3392 (recJ)
DNA repair and recombination proteins [BR:
mtun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MTUNDRAET4_3392 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MTUNDRAET4_3392 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MTUNDRAET4_3392 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
DUF2017
Motif
Other DBs
NCBI-ProteinID:
VFU10279
UniProt:
A0A4U8Z4C3
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All DBs
Position
1:3089856..3091673
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AA seq
605 aa
AA seq
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MSDSITSSSRPFLGVQRSALGLAWRDRLDANGQARALAIAQLQGHGDILSRILAGRGVGP
ETSEDYLDPSLRRLLPDPHCLKDMDAAADRIAHAVERGDKIAIFGDYDVDGAASSALLAD
YFEACGISSVVYIPDRIFEGYGPNIAAIQTLAAAGAKLLITVDCGTMSYAPLVEARRLGL
DPIVIDHHQAPETLPDALVVNPNRQDDLSQLGQLCAAGVVFMTLIALNRLLRARGFFSFR
PEPDLLAGLDLVSLATIADVAPLSGLNRAFVTKGLAVMRRRARPGLAALFDVAKIDGPPR
PYHLGFLIGPRINAGGRIGDAALGARLLSIADPADARRIAGELDRLNRERQVLEGGTLEE
AEAQALARLGADDVGAAILVASDDWHPGVVGLVASRLKDKFRRPAFAIAFSPNGGSGTGS
GRSIPGVDLGFVVREAVEAEILVKGGGHAMAAGITIRPERVEDFRAFLEIALAKKVAEGR
AEQALLIDAALTAAGATPTLVKALERAGPYGSGNAEPVFALPAHRLLDVSEVGNGHIRLR
AQAGDGAKIDGIAFRASGQPLEHALRAARGAMVHLAGTLALDQWGGAERVQLRLLDIARV
DQRMA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattctattacctcgtcgagccgtccgtttcttggcgtgcagcgctctgcgctt
gggctcgcctggcgagatcggcttgacgccaacggacaggcgcgagccctcgccatcgcc
cagctgcagggtcacggcgacattctttcccgcattctcgccggccgcggagttggcccc
gagacctcggaagattatcttgatccgagtttgcggcgactcttgcccgatccgcactgc
ctgaaggacatggatgctgcggcggacagaatcgcacatgcggtcgagcgcggcgacaaa
atagcgatattcggcgattatgacgtcgacggcgcggcgtcctccgccttgctggctgat
tattttgaggcttgcggcatatcgtccgtcgtctatatccccgatcgcatttttgaagga
tatggtccgaatatcgccgccatacaaacattggccgcagccggcgccaagcttctgatt
actgtcgattgtggcacaatgagctacgcgccgcttgtcgaagcgcggcgccttggcctt
gatccgattgtcatcgaccatcatcaggcgccggagacgttgccggacgcgctcgtcgtc
aatccgaaccggcaggatgatctctcacagttgggtcagctgtgcgcggccggcgtcgta
tttatgactctgatagctctcaatcgactcttgcgggctcgggggttcttttcttttcgc
ccggaaccggatcttcttgcgggactagatctggtttcgctggcgaccatcgccgatgtc
gccccgttgagcggcctcaaccgcgccttcgtcactaaaggattggcggtcatgcggcgg
cgagcgcgaccgggccttgcggcgctctttgacgtggccaagatcgatggaccgccaagg
ccctatcatcttggctttctgattggtcctcgcatcaacgccggtggccggatcggcgat
gcagcgctcggcgcacggctcctcagcatcgccgatccggccgacgcccgacgcatcgcg
ggagagctcgatcgcctcaaccgcgagcggcaggtgctcgaaggcgggacgctggaggag
gccgaggcgcaagcgctcgccagacttggcgccgatgacgttggcgcggcgatcctcgtc
gcttcggacgattggcatcctggcgtcgtcggacttgtcgcctcaaggctgaaagacaaa
ttccgccggccagcctttgcgattgctttttccccaaatggcggatcagggaccggatcg
gggcgttcgattcccggtgttgatcttggcttcgtcgtccgcgaggcggtcgaggccgag
attctggtgaagggcggcggccacgccatggccgccggaattacgatccgaccggagcgg
gtcgaggattttcgcgcctttctggaaatcgccctggctaaaaaggtggccgaaggccgc
gcggagcaggctctcctgatcgacgcggctctgaccgcggctggcgcgacgccgaccctg
gtcaaggctttggagcgcgccggcccgtatggatccggcaatgccgaacccgttttcgct
ttgccggcccatcgacttctcgatgtctctgaggtgggcaacggacacattcggctgcgc
gcccaagcgggcgatggggcgaagatcgacgggatcgcgttccgcgcaagcggacagcca
ttggagcatgcgcttcgcgcagcccgcggcgcgatggttcatttggcggggactttggcc
ttggatcagtggggtggcgcggagcgcgttcagctgcgcttgctggatatcgctcgcgtt
gaccaacgtatggcgtga
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