Methylocella tundrae: MTUNDRAET4_3424
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Entry
MTUNDRAET4_3424 CDS
T05970
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mtun
Methylocella tundrae
Pathway
mtun03030
DNA replication
mtun03430
Mismatch repair
mtun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTUNDRAET4_3424 (dnaE)
03430 Mismatch repair
MTUNDRAET4_3424 (dnaE)
03440 Homologous recombination
MTUNDRAET4_3424 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtun03032
]
MTUNDRAET4_3424 (dnaE)
03400 DNA repair and recombination proteins [BR:
mtun03400
]
MTUNDRAET4_3424 (dnaE)
Enzymes [BR:
mtun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTUNDRAET4_3424 (dnaE)
DNA replication proteins [BR:
mtun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTUNDRAET4_3424 (dnaE)
DNA repair and recombination proteins [BR:
mtun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTUNDRAET4_3424 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
T2SSK
DUF6374
DUF655
Motif
Other DBs
NCBI-ProteinID:
VFU10311
UniProt:
A0A4U8Z4S3
LinkDB
All DBs
Position
1:3121642..3125319
Genome browser
AA seq
1225 aa
AA seq
DB search
MKIKNAVRGCVWRANATVLSVRRRNPARPRCLPKTLDDSAAVATRRRFQRRLALESILPD
FVWRPNVETSMDPMSLSRIEADVGFVHLHVHSSYSLREGAMGIGKLAKFACADKMPALAI
TDTNNLFGALEFSEKLAKEGVQPIAGLQITLDFGDGATLAPRGEETGAGRASVVLLARNE
AGYLNLMHIASRAWLDPEPGETPHVALARLRGHTEGLIALSGGPGGPLDRAFALNRPEQA
TLRAEALQELFPDCFYVELQRHNLPSEREIEPRLLDLAYRRSLPLVATNEAYFAAASDYE
AHDALICIAEGAVVGDGARRQLSPEHRFKTRSEMIALFADLPEATRNTVEIARRCAYRPL
TRKPLLPRFSATGAFEEEAAALRAEAEAGLEARIAAHGLTPGFTTEQYRARLSFELDVIV
KMKFPGYFLIVSDFIKYAKAQGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLN
PERVSMPDFDIDFCQDRRDEVIAYVRRRYGVDKVAQIITFGSFLARGVMRNVGRVLEMPL
GQVDRLAKLVPQNPAAPVSLKQAIDTEPRLKEAAEAEPRVAKMLQIAQTLEGLYSNASTH
AAGIVIGDRPLEELVPLYRDPKSDMPATQYNMKWVEPAGLVKFDFLGLKTLTTLSTCVKL
LARRGIAVEIDKIPLDDAKTYEMLGRGETVGVFQLESAGMRKALVEMRADRFEDIIALVA
LYRPGPMANIPRYCAVKAGEEEADYIHPKIEQVLKETFGVIIYQEQVMQIAQILSGYSLG
EADLLRRAMGKKIKAEMDAQRDRFVRGAIDNGLNKAKANEIFDLLAKFADYGFNKSHAAA
YALIAYQTAWFKANYPLEFLAASMTLEKSNTDKLAEFSNEVRRLKGRVEPPSIQRSGVDF
EVHPDASGELSIRYALGAIKGVGEGHAEAMVSARGENPFRDFADLAGRVDPRGINKRMLE
SLVAAGAFDELEPDRARVFGAIEAVLAYAHRRDEERRAGQSALFGAGADAQLPLPKAKPW
TLADRLQREFDSVGFFLSGHPLDAYAAVLSRLRVQRWTDFARSVKQGASGGRLAATVLDR
QERRTKSGSKMGIVQLSDQSGQYEAILFQEGLNQYRDLLEKGASLLLGLQASADGEDVRA
RIVSAEPLDLAASRVQKGLRIFVADDRPLPEIKQNLRPQGDGEVALILQTSTGEVELKLP
GKYLVSAQAAGLLKAIPGIIGVEHV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaaaatgcagtgcgcggttgtgtttggcgcgccaacgcaactgttcttagc
gtccgcaggcgaaaccccgcccggccacgctgcctccctaaaacgttggatgacagcgcg
gccgtcgcaacgcgccgtcgctttcagcgccgactggcgctagaatccatcctgccggat
tttgtatggcggccgaatgtcgagacctcaatggatcccatgtctttaagccgcatcgag
gccgacgtcggctttgtgcaccttcatgtccatagctcttattccctgcgcgaaggcgcg
atgggcatcggcaagctcgccaaattcgcttgcgccgacaaaatgccggcgctggcgatc
accgacaccaacaatctcttcggcgcgctcgaattttccgaaaagctggcgaaagagggc
gtgcagccgatcgcaggactgcagatcacgctcgatttcggcgatggcgcgacgctcgcc
ccgcgcggagaggagaccggcgccgggcgcgcttcagtcgttctcctcgccaggaacgaa
gccggctatctgaatttgatgcatatcgcctcccgcgcgtggcttgatccagagcccggc
gagacgcctcacgtcgcgcttgcgcgcttgcgcggccacaccgaaggtctgattgcgctg
tccggcggcccaggcggcccgctcgaccgcgccttcgctctcaatcgccccgaacaggcc
actttgcgcgcagaggcgcttcaagaacttttcccggattgcttctacgtcgagcttcag
cggcacaatctgccgtccgaacgcgagattgagccgcgcctcctcgatctcgcctatcgc
cgctcccttccgctcgtcgcaacaaacgaggcctatttcgccgccgcgtccgattatgag
gctcatgacgccctgatctgcattgccgagggcgcggtcgtcggtgatggcgcgcgccgc
cagctctcgcccgagcaccgcttcaagacccgctcggagatgatcgctctcttcgccgat
ctgcccgaggcgacccgcaacaccgtcgaaatcgcgcggcgctgcgcttatcggccgctg
acgcgcaagccgctgctgccgcgtttttccgcgactggcgcgttcgaggaagaggcggcc
gcgctgcgcgctgaggccgaggcggggcttgaggcccgcatcgccgcgcatggtctgacg
cccggatttacgaccgagcaatatcgcgcgcggctgtctttcgaactcgacgttatcgtc
aaaatgaagtttccgggctattttctgatcgtctctgattttatcaaatacgccaaggcg
caaggcattccggtcggcccgggccgcggctcgggagcgggatcgctcgtcgcttacgcg
ctgaccatcaccgatctcgatccgatccgcttcggcctcctgttcgagcgctttctcaat
cccgaacgcgtttcgatgccggatttcgacatcgacttctgccaggaccgccgcgacgag
gtgatcgcctatgtccggcgtcgctatggcgtggacaaggtcgcgcagatcataaccttc
ggctcctttctggcgcgcggcgtgatgcgcaatgtcggccgcgtgctcgaaatgccgctc
ggccaggtcgatcggctggccaagctcgtgccgcagaacccggcggcgcccgtcagcctg
aaacaggcgatcgacaccgagccgcgcctgaaagaagccgccgaagctgagcctcgcgtc
gccaaaatgctgcagatcgctcagacgctggaagggctctactccaacgcctccacccat
gcggccggcatcgtcatcggcgaccgcccgctcgaagaactcgtgccgctctatcgcgat
ccgaaatccgacatgccggcgacccagtacaatatgaaatgggtcgagccggccggcctc
gtgaaattcgattttctgggcctcaagacgctgacgacgctatccacatgcgtcaagctt
ctggcccggcgcggcattgcggtcgaaatcgacaagatccccctcgatgacgcaaaaacc
tatgaaatgctggggcgcggcgagacggtcggcgtgttccagctggaaagcgccggcatg
cgcaaggcgctcgtcgagatgcgcgcggaccgcttcgaggacatcatcgcgcttgtcgcc
ctctaccggccgggaccgatggccaatatcccgcgctattgcgccgtgaaggcgggcgag
gaggaggccgactacatccaccccaagatcgagcaggtcctgaaggagactttcggcgtc
atcatctatcaggaacaggtgatgcagatcgcgcagatcctctccggctattcgctcggc
gaagccgatctcctgcgccgcgccatgggcaaaaagatcaaggccgagatggacgcccag
cgcgaccgcttcgtgcgcggcgccattgataatgggctgaacaaggccaaggccaacgaa
atcttcgatctgctcgccaaattcgctgattacggcttcaacaagagccatgcggcggcc
tatgcgctgatcgcctatcagaccgcctggttcaaggccaattacccgctggaatttctg
gccgcctccatgacgctggaaaaatccaacaccgataagctcgccgaattttcaaacgag
gtccgccgcctgaaagggcgcgtcgagccgccctcgatccagcgctcgggcgttgatttc
gaggttcatcccgacgcttccggcgaactttccatccgctacgcgctcggcgccatcaag
ggcgtcggcgaaggccacgccgaggcgatggtttccgcgcggggcgagaatccgttccgg
gattttgccgatctcgccgggcgtgtcgatccgcgcgggatcaacaagcgcatgctcgaa
agcctcgtcgcggcgggcgcctttgacgagctggagcccgaccgcgcccgcgtttttggc
gccatcgaagcggtcctcgcctatgcccaccggcgcgacgaggagcgccgcgccggccag
agcgcactctttggcgcaggcgccgacgcgcaattgccgctgccgaaagcaaaaccctgg
acgctcgccgaccggcttcagcgcgaattcgactccgtcgggttttttctctccggccat
ccgctggacgcctatgccgccgtgctgagccggttgcgcgtgcagcgctggacggatttt
gcccgctcggtcaaacagggggcgtccggggggcggctcgccgccaccgtgctcgaccgg
caggagcggcgcaccaaatccggctcgaaaatggggatcgtgcagctctccgatcagtcc
ggccagtatgaggcgatcctgtttcaggagggcctcaaccaatatcgcgaccttctggaa
aaaggcgcttcgctcctgctcggcctgcaggccagcgccgatggggaggacgttcgcgcc
cgcatcgtctccgccgaacctttggacctcgccgcgagccgtgtgcaaaaaggcttgagg
atcttcgtcgccgacgatcggccattgcccgagatcaagcagaacctccgcccccagggc
gacggcgaggttgcgctgatcctgcaaacgtcaacaggcgaagtggagctaaagctgccc
ggcaaatatctggtgtcggcgcaggcggcggggctgctcaaggcgattccgggcatcatc
ggcgtggagcatgtgtga
DBGET
integrated database retrieval system
