Methylocella tundrae: MTUNDRAET4_4087
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Entry
MTUNDRAET4_4087 CDS
T05970
Symbol
ydbK
Name
(GenBank) putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
mtun
Methylocella tundrae
Pathway
mtun00010
Glycolysis / Gluconeogenesis
mtun00020
Citrate cycle (TCA cycle)
mtun00620
Pyruvate metabolism
mtun00650
Butanoate metabolism
mtun00720
Other carbon fixation pathways
mtun01100
Metabolic pathways
mtun01110
Biosynthesis of secondary metabolites
mtun01120
Microbial metabolism in diverse environments
mtun01200
Carbon metabolism
mtun01210
2-Oxocarboxylic acid metabolism
Module
mtun_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MTUNDRAET4_4087 (ydbK)
00020 Citrate cycle (TCA cycle)
MTUNDRAET4_4087 (ydbK)
00620 Pyruvate metabolism
MTUNDRAET4_4087 (ydbK)
00650 Butanoate metabolism
MTUNDRAET4_4087 (ydbK)
09102 Energy metabolism
00720 Other carbon fixation pathways
MTUNDRAET4_4087 (ydbK)
Enzymes [BR:
mtun01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
MTUNDRAET4_4087 (ydbK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4
Fer4_16
Fer4_8
Fer4_10
Fer4_2
Fer4_21
Fer4_9
Fer4_6
Fer4_17
Fer4_4
TPP_enzyme_C
Fer4_15
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
VFU10968
UniProt:
A0A4U8Z5W4
LinkDB
All DBs
Position
1:complement(3713639..3716920)
Genome browser
AA seq
1093 aa
AA seq
DB search
MGARTTMDGNTAVAHIAYRINEVCAIYPITPSSTMAELADQWAAEGRKNIWGAVPVVQEM
QSEGGAAGAVHGALQSGAMTTTFTASQGLLLMLPNMLKIAGELTSTVFHVAARSLATSAL
SIFGDHSDVMTVRTTGFALISSANVQEAHDTALIAEAATLEARVPFLHFFDGFRTSHELN
TLELVGDDDIRAMISNDLVRAHRARALNPENPFIRGTSQNPDTYFQAREAVSPFYARTPK
IVEDAMARFAAVTGRRYGLFEYEGAPDAERVLILMGSGAETARETVKALVARGEKVGALQ
VRLYRPFSAEHFLAALPPSVGAIAVLEQTKEPGATGEPLYLDVIATLAQGVGDGQRSSMP
RVIGGRYGISSKDFTPAMVKSALDQLAKRDAQNKFAGRNSFTLGIDDDLSHSNLAVDPGF
SIEPDNTTRAVFYGLGADGTVGANKNSVKIIAEDAGRYAQGYFVYDSHKSGAQTVSHLRF
GPNPIKAPYLIVSASFVACHQFSFLERQDVLRVAAPGGVFLLNSPYGQNNSWDALPRSVQ
QQIIDKRLRFFVIDASKVARDVGLGARTNTILQTCFFAISGVLPRETAIKHIKESIRHSY
GSKGEAVVAKNFAAVDETLERLFEVTTPLFATNPKDRPPIVAASAPEFVRRFTARMLVGR
GDDIPVSLMPPDGAFPSGTSAYEKRNIAEAVPVWETDLCIQCGQCSFVCPHSVIRAKYYN
EAALAGAPSSFKSAPINARGYPEARFTLQFYVEDCTGCGLCIEACPAISPREPGVKAINL
ATKEPLVATERANIAFFETLPVNDRARVDFANVRGVQFLEPLFEFSGACGGCGETPYLKL
LSQLFGDRAQIANATGCSSIYGGNLPVTPWTKNHEGRGPAWSNSLFEDNAEFGLGFRLAA
DKHLEIARTLLTELAQTVGEDLAADILSAPQIHEYEIRAQRIRVAELKTRLLKLEGEAAQ
DLLSVVDHLVRRSIWIVGGDGWAYDIGYGGLDHVLASGRNVNVLVLDTEVYSNTGGQASK
ATPLGAVAKFAAAGKRVARKDLALQAIAYGNVYVAQVAMGAPIHNRRWMRSGKPRLTMGP
RSSSLTASVSRMA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgagaacgacaatggacggcaataccgcggtggcgcatatcgcctatcgcatc
aatgaagtatgcgccatttacccgatcaccccctcatcgaccatggcggaactcgctgac
cagtgggcggcggaagggcgcaagaacatctggggcgccgttcctgtggtgcaggagatg
cagagcgagggaggagccgctggcgctgtccacggcgcgcttcagtcgggcgccatgacg
acgaccttcacggcctcgcaaggcctgcttctgatgttgcccaatatgctgaagatcgcc
ggcgagctgacatccaccgtgtttcatgtcgccgcgcgctctcttgcgacctcagctctg
tcgatcttcggagaccactccgacgtgatgaccgttcgcaccacaggattcgcgctgatc
tcttccgccaatgtgcaggaggctcatgacacggcgctcatagccgaggccgcgaccctt
gaagcgcgggtccctttcctgcatttcttcgacggctttcgcacctcgcatgaactcaat
acgcttgagcttgtcggcgacgatgacatccgcgccatgatctccaacgatctcgtgcgc
gcccatcgggcccgcgcgctcaaccccgagaacccattcattcgcggcacatcgcaaaac
cccgacacctatttccaggcgcgcgaggcggtcagcccgttctacgccaggacgccgaag
atcgtcgaagacgctatggcgcgctttgcggccgttaccggacggcgctacggcctcttt
gagtatgaaggcgcgcccgacgccgaacgtgtccttatcctgatgggctccggcgccgag
acggcccgggagacggtcaaggcgctggtcgcgcgcggcgagaaagtcggcgcgctccag
gtgcggctctatcgccccttttcagcggagcatttccttgccgcgctgccgccgtcggtc
ggcgcgatcgcggttctggaacagaccaaagagcccggcgccacaggcgaaccgctctac
ctcgacgtcatcgccacgctcgcgcagggcgttggagacggccagcgatcgtcgatgccg
cgcgtcatcggtggccgctatggcatctcgtcaaaagactttacaccggcgatggtgaag
tccgcgcttgatcaactcgccaagcgtgatgcgcaaaacaagttcgcaggacgcaacagc
ttcaccctcggcattgatgacgacctctcccacagcaatctcgcggtggacccaggcttt
tcgatcgagccggacaacaccacccgcgcggtcttttacggccttggcgccgatggcact
gtgggcgcgaataaaaacagcgtgaagatcatcgccgaggatgcggggcgctacgcgcag
ggctatttcgtctatgattcccacaaatccggcgcacagacggtttcgcatctgcggttc
ggcccaaacccgatcaaggcgccctatctcatcgtctccgcaagcttcgtcgcctgccat
cagttcagctttctcgaacggcaggacgtgctgcgcgttgcggcgccgggcggcgtcttt
ctcctcaacagcccctatgggcaaaacaacagctgggatgcgctgccccgctcggtgcag
cagcagatcatcgacaaacgattgcgcttctttgtcatcgacgcctcaaaggtcgcccgc
gacgtcggccttggcgctcgcaccaacactattctgcagacatgtttcttcgctatatcc
ggcgtcttgccgcgcgagacggcgatcaagcatatcaaggaatccatccggcacagctac
ggaagcaagggcgaagcggtcgtagccaagaattttgccgcggtcgatgagacattggag
cgccttttcgaggtcacaacgccgcttttcgcaaccaatccgaaagaccggccccccatc
gttgcggcctccgcccccgagttcgtgcggcgcttcaccgcccggatgctggttgggcgc
ggagacgatattccagtgagcctgatgccgccggacggcgcctttccttccgggacgagc
gcctatgagaagcgcaatatcgccgaggccgtaccagtctgggagactgatctttgcatc
caatgcggacaatgcagcttcgtctgcccgcacagcgtcattcgcgccaaatattacaat
gaggcggcgctcgcgggggcgccatccagcttcaagtcggcgccgatcaatgcgcgcggc
taccctgaagcgcgcttcaccctgcaattctatgtggaggactgcaccggctgcggtctt
tgcattgaagcctgcccggcaatcagcccgcgcgaaccgggcgtcaaggcaatcaacctc
gcgaccaaggagccattggtcgcaacggaacgcgccaacatcgcgttctttgagacattg
ccggtcaatgatcgcgcccgcgtcgatttcgccaatgttagaggcgtgcaatttctcgaa
cctttgttcgagttttccggcgcctgtggcggatgcggcgagacgccttatctcaagctg
ctctcgcaattattcggcgacagggcgcagatcgccaacgccaccggctgctcatcgatc
tatggcggcaatctcccggtgacgccctggaccaagaaccacgaggggcgcgggccagcc
tggtcgaattcgctgttcgaggacaatgcggagtttgggctcggctttcggctggccgcc
gacaagcatctcgaaatcgcccggaccctgctgacagagctcgcccagacggtgggtgaa
gatctcgccgcggatatactaagcgcgccgcaaatccatgaatatgaaatccgcgcccag
cgcatccgcgtcgccgaactcaagacgcgattgctaaaactcgagggcgaggccgcgcaa
gatcttttgtcggtggtcgaccatctcgtgcggcgcagcatctggattgtcggcggcgat
ggctgggcctacgacataggctatggcggcctcgatcacgtgctggcgagcgggcgcaac
gtcaatgtgctggtgcttgacacagaggtctattccaataccggcggccaggcctcgaaa
gcgacgccgctcggcgcggtcgcgaaattcgccgcggcgggcaagcgtgtggcgcgcaaa
gatctcgcgctgcaggcgatcgcctacggcaatgtctatgtggcgcaagtcgccatgggc
gcgccaatccacaacagacgctggatgcgttccgggaagccgaggcttacgatgggccct
cgctcatcctcgcttacagccagtgtatcgcgcatggcatag
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