Mycobacterium tuberculosis CCDC5079: CFBS_0444
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Entry
CFBS_0444 CDS
T02679
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mtur
Mycobacterium tuberculosis CCDC5079
Pathway
mtur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFBS_0444 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtur03400
]
CFBS_0444 (xthA)
Enzymes [BR:
mtur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CFBS_0444 (xthA)
DNA repair and recombination proteins [BR:
mtur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CFBS_0444 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DsbD_N
Motif
Other DBs
NCBI-ProteinID:
AGL98876
LinkDB
All DBs
Position
complement(514352..515227)
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AA seq
291 aa
AA seq
DB search
MPDGTIDGGHPQRPASPRLRSPLLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKC
PDGQFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTE
ARALGATCGGIRVWSLYVPNGRALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGD
WNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQL
RFPKKQGMRIDFILGSPALAARVMDAQIVREERKGKAPSDHAPVLVDLHAG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacggcacaattgacggcggccacccccaacgcccggcttcgccgcgcttgcga
tcgccgctgctgcggctggccacctggaatgtgaattcgattcgcacccggttggatcgt
gtcctcgattggcttgggcgcgccgatgtcgacgtgttggccatgcaggagaccaagtgc
ccggacggccaattcccggccttgccgctgttcgaactcggctatgacgtcgcacacgtc
ggcttcgatcagtggaacggcgtggcgatcgcatcccgcgtcggcctcgacgacgtgcgg
gttgggttcgacggccagcccagctggagcggcaagccggaagtggccgccacgacggag
gcccgtgccctgggcgccacctgcggcggcatccgggtgtggagcctctacgtgcccaac
gggcgcgccctggacgatccgcactacacctacaagttggattggcttgccgcgctgcgt
gatacggccgaaggctggctacgtgacgatcccgccgcaccaatcgcactgatgggcgac
tggaacatcgctccgaccgatgatgatgtctggagcaccgaattcttcgccggctgcacg
cacgtttccgaacccgagcgcaaggcgttcaacgccattgtcgacgcgcaattcaccgat
gtagtacggcctttcaccccgggacccggggtttacacctactgggattacacgcagctg
cggttcccgaagaaacagggcatgcgcatcgacttcatcctcggctcgccggcgttggcc
gcccgggtgatggacgcccagatcgtacgcgaggagcgtaaaggcaaagcgcccagcgac
cacgctccggtgctcgtcgacctgcacgccgggtag
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