Mycobacterium tuberculosis CCDC5079: CFBS_3422
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Entry
CFBS_3422 CDS
T02679
Symbol
pvdS
Name
(GenBank) putative RNA polymerase sigma factor
KO
K22468
polyphosphate kinase [EC:
2.7.4.34
]
Organism
mtur
Mycobacterium tuberculosis CCDC5079
Pathway
mtur00190
Oxidative phosphorylation
mtur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtur00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CFBS_3422 (pvdS)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFBS_3422 (pvdS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtur03019
]
CFBS_3422 (pvdS)
Enzymes [BR:
mtur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.34 GDP-polyphosphate phosphotransferase
CFBS_3422 (pvdS)
Messenger RNA biogenesis [BR:
mtur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFBS_3422 (pvdS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPK2
CutA1
Motif
Other DBs
NCBI-ProteinID:
AGM01855
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All DBs
Position
complement(3601654..3602541)
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AA seq
295 aa
AA seq
DB search
MDIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG
ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG
EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ
LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA
RLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggatataccatccgttgatgtgagcaccgcgaccaacgacggcgcgtcgtcgagagcg
aagggacacagatcagctgcgccgggccggcgcaagatctccgatgccgtctaccaagcc
gaattgtttcggctgcaaacagaattcgtgaagctgcaagagtgggcccggcattcgggt
gcgcgtctggtggtcatcttcgaaggccgtgacggagctggtaagggtggcgccatcaaa
cggatcaccgagtacctcaacccgcgagtggctcgtatcgcggcattgcccgcgccgacg
gatcgcgagcggggtcagtggtactaccagcgttatattgcccatcttcccgccaaaggt
gagatagtgctcttcgatcggtcctggtacaaccgcgccggtgtggagaaggtcatgggt
ttctgtacgccgcaggagtatgtgttgtttttgcggcagaccccgattttcgagcagatg
ctgatcgatgacgggattctgcttcgcaaatactggttttcagtctcagacgccgaacag
ttgcgccgattcaaggctcgacggaatgacccggtccggcaatggaagctcagcccaatg
gacctggaatcggtgtatcggtgggaggactattcgcgcgcaaaggacgagatgatggtg
cataccgacacccccgtcagcccctggtacgtggtggagtctgatatcaaaaagcacgcg
cggctgaacatgatggcccacttgctgtccacgattgactacgcagatgtggaaaagcca
aaggtcaagctgccgccacggccgcttgtgagtggcaactacaggcgtccgccccgcgag
ttgtcgacatacgtcgacgactatgtggccacgttgatcgcccggtga
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