Mycobacterium tuberculosis H37Rv: RVBD_2681
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Entry
RVBD_2681 CDS
T02178
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mtv
Mycobacterium tuberculosis H37Rv
Brite
KEGG Orthology (KO) [BR:
mtv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtv03016
]
RVBD_2681
Enzymes [BR:
mtv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RVBD_2681
Transfer RNA biogenesis [BR:
mtv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RVBD_2681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF7696
Motif
Other DBs
NCBI-ProteinID:
AFN50654
UniProt:
I6XF17
LinkDB
All DBs
Position
2996749..2998065
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AA seq
438 aa
AA seq
DB search
MCPEPSHAGAAESEGTESEPTPLLRPAGGIPDLCVTVGEIAAAAELLDRGRGPFAVDAER
ASGFRYSGRAYLIQIRRAEAGTVLIDPVSHGGDPLTVLAPVAEVLSTNEWILHSADQDLP
CLAEVGMRPPALYDTELAGRLAGFDRVNLAAMVERLLGLGLTKGHGAADWSKRPLPSAWL
NYAALDVELLIELRAAISRVLAEQGKTDWAAQEFEHLRSFESRPPPAAARQDRWRRTSGI
HKVHDRRGLAAVRELWTARDRIAQRRDIAPRRILPDSAIIDAAIADPKSVDDLVALPVFG
GRNQRRSAAVWWAALAAARESPDPPEIAEPANGPPPPGRWVRRKPAAAARLDAARAALTE
VSQRVRVPTENLVSPDLVRRLCWEWEDISQSSPDPIAAVEAYLRTGQARAWQLELVVPIL
TAALTGAPDAGAQGDDGS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtgccccgagccgtctcacgcgggagctgctgagtccgaaggcacggaatcggaaccc
acccccttgctccggcccgccggtgggataccggatctgtgtgtgaccgtcggtgaaatc
gccgctgccgcagaactactggaccgcgggcgcggaccgttcgcggtagacgccgagcgg
gcgtcgggtttccgctactccggccgcgcctacctgattcagatccggcgggccgaggcc
ggcaccgtactgatcgacccggtcagccacggcggtgacccgttgaccgtgctggcgccg
gtcgccgaggtgctcagcaccaacgagtggatcctgcactccgccgatcaggatctgccc
tgtctcgccgaggtcggtatgcgaccgccagcgctatacgacaccgagcttgccgggcgc
ctggccgggttcgatcgagtgaacctggcggccatggtcgagcggttacttggactggga
ttgaccaagggccacggcgcggccgactggtccaagcgcccgctaccctcggcctggctg
aactacgcggcgttggacgtggaactgctcatcgaactacgcgcggcgatctcgcgggtg
ctggccgagcaaggcaaaaccgattgggctgcgcaggaattcgagcacctgcggtcgttc
gaatcaaggccacccccagcggccgcccggcaggaccgctggcgacgaacctcgggtatc
cacaaagtgcatgaccggcgggggctggccgcggtccgcgaattgtggacagcgcgtgac
cgaatcgcccagcgccgcgacatcgcgccccgccggatcttgccggactcggccattatc
gatgccgccatcgccgacccaaagtcagtcgacgaccttgtcgcgttaccggtgttcggc
ggacgcaaccaacgtcgcagcgcggctgtgtggtgggcggcactggcagccgcacgcgaa
agcccagatccgccggagatcgccgaaccggcaaacgggccgccgccgccggggcggtgg
gtcagacggaaaccggcagccgccgcacggctggatgcggcgcgcgcggcgctgacggag
gtgtcgcaacgggtgcgggtaccgaccgagaacctggtctcacctgatctggtgcgacgg
ctgtgttgggaatgggaggacatctcgcagagttctccagacccgattgccgctgtcgag
gcgtacctgcgcaccggccaggcacgggcctggcagctcgaactagtggtccccatcctg
accgcggcgttgacaggggctccggacgccggcgcccagggcgatgatggctcttag
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