KEGG   Methylosinus trichosporium: CQW49_01630
Entry
CQW49_01630       CDS       T05155                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mtw  Methylosinus trichosporium
Pathway
mtw02024  Quorum sensing
mtw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CQW49_01630
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CQW49_01630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtw03019]
    CQW49_01630
   03036 Chromosome and associated proteins [BR:mtw03036]
    CQW49_01630
Messenger RNA biogenesis [BR:mtw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CQW49_01630
Chromosome and associated proteins [BR:mtw03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CQW49_01630
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: ATQ66739
UniProt: A0A2D2CVR9
LinkDB
Position
complement(331326..331589)
AA seq 87 aa
MSSERAQNLQDTFLNFVRKNKVPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGHPIHMFEPGDDSEAAEKQR
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcctcggaacgcgcgcagaacctgcaggatacttttttgaacttcgtgaggaaaaac
aaggttccgctcacgattttcctcgtgaatggcgtcaagcttcaaggcattgtgacctgg
ttcgacaatttttgtctgttgctgcggcgcgacggccattcgcagctcgtctacaaacat
gcgatttccactatcatgcccggtcatccgatccatatgttcgagccgggagacgattcc
gaggccgcggagaagcagcgctag

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