Methylosinus trichosporium: CQW49_01630
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Entry
CQW49_01630 CDS
T05155
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
mtw
Methylosinus trichosporium
Pathway
mtw02024
Quorum sensing
mtw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQW49_01630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CQW49_01630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtw03019
]
CQW49_01630
03036 Chromosome and associated proteins [BR:
mtw03036
]
CQW49_01630
Messenger RNA biogenesis [BR:
mtw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CQW49_01630
Chromosome and associated proteins [BR:
mtw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CQW49_01630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ATQ66739
UniProt:
A0A2D2CVR9
LinkDB
All DBs
Position
complement(331326..331589)
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AA seq
87 aa
AA seq
DB search
MSSERAQNLQDTFLNFVRKNKVPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGHPIHMFEPGDDSEAAEKQR
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggaacgcgcgcagaacctgcaggatacttttttgaacttcgtgaggaaaaac
aaggttccgctcacgattttcctcgtgaatggcgtcaagcttcaaggcattgtgacctgg
ttcgacaatttttgtctgttgctgcggcgcgacggccattcgcagctcgtctacaaacat
gcgatttccactatcatgcccggtcatccgatccatatgttcgagccgggagacgattcc
gaggccgcggagaagcagcgctag
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