Methylosinus trichosporium: CQW49_04190
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Entry
CQW49_04190 CDS
T05155
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mtw
Methylosinus trichosporium
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtw03032
]
CQW49_04190 (ihfB)
03036 Chromosome and associated proteins [BR:
mtw03036
]
CQW49_04190 (ihfB)
03400 DNA repair and recombination proteins [BR:
mtw03400
]
CQW49_04190 (ihfB)
DNA replication proteins [BR:
mtw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CQW49_04190 (ihfB)
Chromosome and associated proteins [BR:
mtw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CQW49_04190 (ihfB)
DNA repair and recombination proteins [BR:
mtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CQW49_04190 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ATQ67179
UniProt:
A0A2D2CWY7
LinkDB
All DBs
Position
876557..876847
Genome browser
AA seq
96 aa
AA seq
DB search
MIKSELIQRIASRNGHLYQRDVETIVTTILDEIALALARGDRVELRGFGAFSVKRREART
GRNPRTGEQVSVEEKSVPFFKTGKEMRERLNETSNG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtccgaattgatccaacgtatcgcttcccgtaacgggcacctctatcaacgc
gacgtcgagacgatcgtcaccacgattctcgacgagatcgccctggcgctcgcgcgcggc
gaccgggtcgagctgcgcggcttcggcgccttctcggtcaagcggcgggaggcgcgcacc
ggccgcaatccccgcaccggcgagcaggtctcggtagaagagaaatccgtgcccttcttc
aagaccggcaaggaaatgcgcgagcggctgaacgaaacgagcaacggctga
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