Methylosinus trichosporium: CQW49_04705
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Entry
CQW49_04705 CDS
T05155
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mtw
Methylosinus trichosporium
Pathway
mtw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQW49_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtw03019
]
CQW49_04705
Enzymes [BR:
mtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CQW49_04705
Messenger RNA biogenesis [BR:
mtw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CQW49_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ATQ67269
UniProt:
A0A2D2CX88
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All DBs
Position
complement(974671..976014)
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AA seq
447 aa
AA seq
DB search
MTKFADLGLAEVILRALAQEGYVAPTPIQAQAIPSLLEGRDLLGIAQTGTGKTAAFALPI
LHRLLDERRRPAPQTARALVLAPTRELAAQIADSFRSYGRFARMSVGVIVGGVGHGPQIK
MLASGVDVLVATPGRLLDHIASGALRLDTTRTIVLDEADHMLDLGFLAPIRKIVSRLPKQ
RQSLFFSATMPKEIAALAADMLNNPVSVQVTPTATTAERVDQRVLLVDGAAKRDVLVELF
ADPALACAIVFTRTKRGADRVSQHLEAHGVGSAAIHGNKSQSQRMRALDDFRRGRTRALV
ATDIAARGIDVDGVTHVVNFELPETPEAYVHRIGRTARAGAGGAAISLCDNSERPLLRAI
EKSTRQSLPVVDRRSAQAGQQAGQEEGAPRRAPQEHRRPHEPRPDASRKPAGRAHAHGKP
AAGGRPGKPSGAGRPQKSGASSSGRRP
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaatttgccgatctcggcctcgccgaggtcattttgcgcgcgctcgcgcaagaa
ggttatgtcgctccgacgccgatccaggcgcaggcgatcccctcgctgctcgagggaaga
gatttgttgggcatcgctcaaaccggcaccggcaagaccgcggcctttgcgctgccgatc
cttcatcgactgctcgacgagcggcgccgtcctgcgccgcagacggcgagggcgctcgtg
ctcgcgccgacccgcgagctcgccgcgcagatcgccgacagcttccgctcctatggccgc
ttcgcccgcatgagcgtcggcgtcatcgtcggcggcgtcggccatggcccgcagatcaag
atgctcgccagcggcgtcgacgtgctggtggcgacgcccggtcggctgctggatcatatc
gcgagcggcgccctgcggctcgacacgacgcggacgatcgtgctcgacgaggccgatcat
atgctcgacctcggctttctcgcgccgatccgcaagatcgtgtcgcgcctgccgaaacaa
aggcagagcctgttcttctcggcgaccatgccgaaggagatcgccgcgctcgccgccgac
atgctgaacaatccggtctccgtgcaggtgacgccgacggcgaccaccgccgagcgcgtc
gatcagcgcgtgctgctggtggacggcgcggccaagcgcgacgtgctggtcgagctcttc
gccgatccggcgctcgcctgcgcgatcgtgttcacgcgcaccaagcgcggcgccgatcgc
gtgtcgcagcatctcgaggcgcatggcgtcggctcggcggcgatccatggcaataagagc
cagagccagcgcatgcgcgcgctcgacgattttcgtcgcggccgcacgcgcgccctcgtc
gccaccgatatcgccgcgcgcggcatcgatgtcgacggcgtgacgcatgtcgtgaatttc
gagctgcccgagacgcccgaggcctatgtgcatcgcatcggccgcacggcgcgcgccggc
gccggcggcgccgcgatctcgctgtgcgacaatagcgagcggccgctgctgcgggcgatc
gagaaatcgacgcggcagtcgttgccggtcgtcgatcggcgcagcgcgcaagcgggacag
caagcagggcaggaagaaggcgcgccgcgccgcgcgccgcaggagcatcgccgcccccat
gagccgcgcccggatgcgagccgcaagcccgcgggccgcgcccatgcgcatggcaagccg
gccgccggcggacgtcctggcaagccctccggcgccggtcgcccgcagaagagcggcgcg
agctcctccggccgtcggccgtaa
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