Methylosinus trichosporium: CQW49_06520
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Entry
CQW49_06520 CDS
T05155
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mtw
Methylosinus trichosporium
Pathway
mtw03030
DNA replication
mtw03430
Mismatch repair
mtw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CQW49_06520 (holA)
03430 Mismatch repair
CQW49_06520 (holA)
03440 Homologous recombination
CQW49_06520 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtw03032
]
CQW49_06520 (holA)
03400 DNA repair and recombination proteins [BR:
mtw03400
]
CQW49_06520 (holA)
Enzymes [BR:
mtw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CQW49_06520 (holA)
DNA replication proteins [BR:
mtw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CQW49_06520 (holA)
DNA repair and recombination proteins [BR:
mtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CQW49_06520 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
ATQ67580
UniProt:
A0A2D2CXW0
LinkDB
All DBs
Position
1369091..1370122
Genome browser
AA seq
343 aa
AA seq
DB search
MVAVKSREAQRFVDAPPAAIFLFLLHGADAGLVRERALALIAKRVDDRRDPFQCIEMSGD
AVAADPLSLLDEANTVPMFGGRRAILVEAGSKSINAPLEQLLAAPPRDCAVVVTAGVLKR
DAPLRKLIEPAKLGAAIECQPDAEQDLEALIDESLRAAGLAATPEARMLLRAALGEDRRM
SRAELAKLALYKHGETTVEAKDVEDIVAHASAIASDRLVIDAFSGVAAAAGEELDRALAG
GADPGQLLGGALRYAMALHRARLAADREGGRTDAGVTILMRSGFGVFPRPALERHLKSWT
AAKIAGVIAPLREAQRRARVDASVAEIEAGRALLAIAARAGRK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgtcaagagccgcgaggcgcagcgcttcgtcgatgcgccgcccgcggcgatc
tttctgttcctgctccatggcgccgacgccggcctcgtgcgcgagcgcgcgctcgcgctg
atcgccaagcgcgtggacgatcgccgcgatccgttccaatgcatcgagatgagcggcgac
gccgtcgccgccgatccgctgtcgctgctcgacgaagccaatacggtgccgatgttcggc
gggcggcgggcgatcctggtcgaggcggggtccaaatccatcaatgcgccgctcgagcaa
ttgctcgccgcgccgccgcgcgattgcgccgtggtggtgaccgcgggcgtgctgaagcgc
gacgcgccgctgcgcaagctgatcgagcccgccaagctcggcgccgcgatcgaatgccag
ccggacgccgagcaggacctcgaagcgctgatcgacgagagcctgcgcgcggcggggctc
gccgccacgcccgaggcgcgcatgctgctgcgcgccgcgctcggcgaggaccgccgcatg
agccgcgccgagctcgccaagctcgcgctctacaagcatggcgagacgacggtcgaggcg
aaggatgtcgaggacatcgtcgcccacgcctccgccatcgcctccgaccggctggtgatc
gacgccttctcgggcgtggcggcggcggccggggaggaactcgaccgggcgctcgcagga
ggcgccgatccgggacaactgctcggcggcgcgctgcgctatgcgatggcgctgcatcgc
gcgcgcctcgccgccgatcgcgagggcgggcggacggacgccggcgtcaccatattgatg
cgcagcggcttcggcgtgtttccgcgtccggcgctggagcgccatttgaagagctggacc
gcggccaagatcgcgggcgtgatcgcccccttgcgcgaggcgcagcggcgcgcaagggtc
gacgcttcggtcgccgagatcgaggcgggccgcgcgctgctggcgatcgcggcaagggcg
gggaggaagtga
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