Methylosinus trichosporium: CQW49_11990
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Entry
CQW49_11990 CDS
T05155
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mtw
Methylosinus trichosporium
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtw03016
]
CQW49_11990
Enzymes [BR:
mtw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CQW49_11990
Transfer RNA biogenesis [BR:
mtw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CQW49_11990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATQ68520
UniProt:
A0A2D2D0L1
LinkDB
All DBs
Position
2490393..2491007
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AA seq
204 aa
AA seq
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MTIRLHQGDLPDGADLGPVVAIDTETLGLNPHRDRLCLVQLSGGNGDADLVRIAPGQTRA
PNLEALLANPNVLKLFHFGRFDIAVMAKTFGVMAEPVYCTKIASKLIRTYTDRHGLKDLV
RELLGVEISKQQQSSDWGADTLSDAQLSYAASDVLYLHALREKLDVMLAREHRTDLAAAC
FAFLPMRARLDLAGWPEIDIFSHE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcttgcaccagggcgatctgccggacggcgccgatctcgggcccgtcgtc
gccatcgacaccgaaaccctcggcctcaacccgcatcgcgaccggctgtgcctcgtgcag
ctctccggcggcaatggcgacgccgatctcgtgcgcatcgccccggggcagacgcgcgcg
cccaatctcgaggcgctgctggcgaaccctaatgtgctgaagctgttccatttcggccgc
ttcgacatcgccgtcatggccaagaccttcggggtcatggccgagccggtctattgcacc
aagatcgcctccaagctcattcgcacctacaccgaccgccacgggctgaaggacctcgtg
cgcgaattgctcggcgtcgagatctccaagcagcagcaatcgtcggattggggcgccgat
acgctctccgacgcgcagctctcctacgccgcctccgacgtgctctatctccatgcgctg
cgcgagaagctcgacgtcatgctggcgcgcgagcatcgcaccgacctcgccgcggcctgc
ttcgccttcctgccgatgcgggcgcggctcgatctcgccggctggccggagatcgacatc
ttctcgcatgaatga
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