Methylosinus trichosporium: CQW49_15560
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Entry
CQW49_15560 CDS
T05155
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mtw
Methylosinus trichosporium
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtw03021
]
CQW49_15560 (rpoH)
Transcription machinery [BR:
mtw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CQW49_15560 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
Sigma70_r4_2
LysM
Motif
Other DBs
NCBI-ProteinID:
ATQ69136
UniProt:
A0A2D2D2E3
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All DBs
Position
3252622..3253506
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AA seq
294 aa
AA seq
DB search
MANALPTLSGDSGLSRYLAEIRRFPMLEPEQEYMLAKRWREHEDPNAAQKLVTSHLRLVA
KIAMGYRGYGLPIGEIVSEGNVGLMQAVKRFEPERGFRLATYAMWWIRASIQEYILRSWS
LVKMGTTASQKKLFFNLRKAKSKISAFEDGDLTPEHVGEIARRLGVTNQDVIEMNRRMSG
DASLNAPLREEGEGEWQDWLVDDSSDQERILVDQEEAGNRLDALRGALTVLNPRERRIFE
ARRLSEDPVTLEDLSTEFGVSRERVRQIEVRAFEKVQSAVRAGMAQLEALPAPM
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcccttcccaccctctcaggcgacagcggcctctcgcgctatctcgcagaa
atccgccggttccccatgctggagccggagcaagaatatatgctcgccaaacgctggcgc
gagcatgaggaccccaacgccgcgcaaaagctcgtcacgtcgcatctgcggctcgtggcc
aagatcgccatgggctatcgcggctatggcctgccgatcggcgagatcgtctccgagggc
aatgtcggcctgatgcaggccgtcaagcgcttcgagcccgaacgcggcttccgcctcgcc
acttatgcgatgtggtggatccgcgcttcgattcaagaatatatcctgcgttcctggtcg
ctcgtcaaaatgggcaccacggcgagccagaagaagctgttcttcaatctgcgcaaggcc
aagagcaagatctcggccttcgaggacggcgatctgacgcccgagcacgtcggcgagatc
gcccgccgcctcggcgtgaccaatcaggatgtgatcgagatgaaccgccgcatgtccggc
gacgcctcgctcaacgcgcctttgcgcgaggagggcgaaggcgagtggcaggactggctc
gtcgacgattcctccgaccaggagcgcatcctcgtcgaccaggaggaggcgggcaaccgg
ctcgatgcgctgcgcggcgcgctcaccgtgctcaacccgcgcgagcgtcgcatcttcgag
gcgcgccggctctccgaggatccggtcacgctcgaggatctctccaccgagttcggcgtc
tcgcgcgagcgcgtgcgccagatcgaggtgcgcgccttcgagaaggtgcaatcggcggtg
cgggccggaatggcgcagctcgaggctctgcccgcgccgatgtga
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