Methylosinus trichosporium: CQW49_21185
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Entry
CQW49_21185 CDS
T05155
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtw
Methylosinus trichosporium
Pathway
mtw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQW49_21185 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtw03019
]
CQW49_21185 (recQ)
03400 DNA repair and recombination proteins [BR:
mtw03400
]
CQW49_21185 (recQ)
Enzymes [BR:
mtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CQW49_21185 (recQ)
Messenger RNA biogenesis [BR:
mtw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CQW49_21185 (recQ)
DNA repair and recombination proteins [BR:
mtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CQW49_21185 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATQ70119
UniProt:
A0A2D2D5L6
LinkDB
All DBs
Position
4492591..4494387
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AA seq
598 aa
AA seq
DB search
MSQLPKKARALLKSVFGYEDFRPGQAEIIAAVLAGEGVLAIMPTGSGKSMCYQLPALVDE
RLTVVVSPLIALMRDQVRQMRACGVSAATLNSMNDAQENDEARRALRSGELRLLFVSPER
LFAPGVLDTLARAGARRLAIDEAHCVSEWGHDFRPEYRDLGAAAEALGAQVVGLTATADK
ATRADIAKRLFKTDPHVFLHSFDRPNLALNFVAKDQPRRQLTRFLDKHRGESGIVYCSSR
DATEKLAEFFAEQGHQTICYHARLDQAVRNRNQDRFLQEDGIIAVATIAFGMGVNKPDVR
FVAHADMPSSVESYYQEIGRAGRDGLPADTLTLYGLDDMAFRRRQIDQKDVDDERKRVEH
DRFSALAMLCETPVCRRQTLLAYFDEESPPCGRCDICLQQVKIYDGTVDAQKALSAAMRT
GQRFGANYLAEILIGAATEAVRRNGHETIKTFGVGKDRTKQEWSGIIRQLFAARAFASTE
HGGFMLTPKGEDILFGRAQISLRLDALAPRERRKEAPRGEKLDAADDRVLAALKRKRLEL
AREAGLPAFMIFPDRTLIEMASRRPATLAEMRMVQGVGEHKLSQYGEVFLEALQEALR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcttccgaaaaaagcccgcgcgctgctcaaatccgtgttcggctatgaggat
ttccgtcccggccaggcggagatcatcgccgcggtgctggccggcgagggcgtgctcgcc
atcatgccgacgggcagcggcaaatccatgtgctatcagctgcccgctctcgtcgacgag
cggctcaccgtcgtcgtctcgccgctcatcgccctgatgcgcgatcaggtgcggcagatg
cgcgcctgcggcgtttccgccgcgacgctcaattcgatgaatgacgcgcaggagaatgac
gaggcgcgccgcgcgctgcgctcgggcgagctgcgcctcttgttcgtctcgccggagcgg
ttgttcgcgcccggcgttctcgacacgctcgcccgcgccggcgcgcggcgcctcgccata
gacgaagctcattgcgtctctgaatggggtcatgacttccgccccgaatatcgcgacctg
ggcgccgccgcagaagcgctcggcgcgcaggtcgtcggcctcaccgccaccgcggacaag
gcgacgcgcgcggatatcgccaagcgtctgttcaagaccgacccgcatgtctttctgcac
agtttcgatcggcccaatctggcgctgaacttcgtcgccaaggatcagccgcgccgacag
ctgacgcgcttcttggacaagcatcgcggcgagagcggcatcgtctattgctcgtcgcgc
gacgccaccgagaagctcgcggagtttttcgcagagcagggacatcagaccatctgctat
catgcacggctcgatcaggcggtgcgcaatcgcaatcaggatcgcttcctgcaggaagac
ggaatcatcgccgtcgcgacgatcgccttcggcatgggcgtcaacaagcccgacgtgcgc
ttcgtcgcccatgccgacatgccgtcgagcgtcgaatcctattatcaggagatcggccgc
gccggccgcgacggactgcccgccgacacgctgacgctctatggcctcgacgacatggcc
tttcgtcgtcgccagatcgaccagaaggatgtcgacgacgagcgcaagcgcgtcgagcac
gaccgcttctccgcgctcgccatgctgtgcgagacgcccgtttgccggcggcagacgctg
ctcgcctatttcgacgaggagagcccgccttgcgggcgttgcgacatttgtctgcagcaa
gtgaagatctatgacggaacggtcgacgcgcagaaggcgctgtcggcggcgatgcggaca
gggcagagattcggcgccaattatctcgccgaaattctcatcggcgcggcgaccgaggcg
gtgcgccgcaacggccatgagaccatcaagacattcggcgtcggcaaggatcgcaccaag
caggagtggagcgggatcattcgccaattattcgccgcgcgcgcgttcgcgagcacagag
cacggcggtttcatgctgacgccgaagggtgaggacatattgttcggccgcgcgcaaatc
tcgttgcgtctcgacgcattggcgccgcgcgagcggcgcaaggaggcgccgcgcggcgag
aagctcgacgcggcggatgatcgcgtgctcgcggcgttgaagcgcaagcgcctcgagctg
gcgcgggaagcgggcctgccggcctttatgatttttcccgatcggacattgatcgagatg
gcgtcgcgccggcctgcgactctcgccgagatgcgcatggtgcaaggcgtcggcgagcat
aagctctcacaatatggcgaagtctttctcgaggcgctgcaggaggcgctgcgataa
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