Mycobacterium tuberculosis EAI5: M943_13605
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Entry
M943_13605 CDS
T02749
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mtx
Mycobacterium tuberculosis EAI5
Brite
KEGG Orthology (KO) [BR:
mtx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtx03016
]
M943_13605
Enzymes [BR:
mtx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
M943_13605
Transfer RNA biogenesis [BR:
mtx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
M943_13605
Prokaryotic type
tRNA splicing ligases
M943_13605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGQ35890
LinkDB
All DBs
Position
2945234..2946655
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AA seq
473 aa
AA seq
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MKIVEETPYRFRIEQEGAMRVPGIVFASRSLLPRDEGDMALMQVVNVATLPGIVRASYAM
PDVHWGYGFPIGGVAATDVDNDGVVSPGGVGFDISCGVRLLVGEGLDREELQPRLPAVMD
RLDRAIPRGVGTAGVWRLPDRNTLQEVLTGGARFAVEQGHGVALDLERCEDGGVMTGADA
AKISDRALQRGLGQIGSLGSGNHFLEVQAVDRVYDPVAAAPMGLAEGTVCVMIHTGSRGL
GHQICTDHVRQMEQAMGRYGIAVPDRQLACVPVHSPDGQAYLAAMAAAANYGRANRQLLT
EATRRVFADATGTPLDLLYDVSHNLAKIETHPIDGQLRSVCVHRKGATRSLPPHHHELPA
ELAAVGQPVLIPGTMGTASYVLAGVTGNPAFFSTAHGAGRVLSRHQAARHTSGEAIRASL
AKRGIIVRGTSRRGIAEEKPEAYKDVDEVIEASHQSGLARKVARLVPLGCVKG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtcgaggagaccccataccggttccggatcgaacaagagggcgcgatgcgg
gtgcccgggatcgtgttcgcgtccaggtcgttgctgcctcgtgacgaaggcgacatggcc
ctgatgcaagtggtcaacgtggctacgctgccggggattgtccgggcctcgtatgcgatg
cccgatgtgcactggggatatggtttcccaatcggcggcgtggccgcaaccgacgtcgac
aatgatggagtcgtttccccaggcggtgtcggcttcgatatttcgtgcggcgtaagactc
ttggtcggcgaagggctggaccgcgaggagctgcaaccacggttgccggcggtcatggac
cggcttgatcgcgcgataccgcgcggagtgggcacggcgggtgtgtggcgactacccgac
cggaacacgctgcaggaggtgctcaccggtggtgcccggtttgcggtggaacaggggcat
ggcgtcgcgctagacctcgagcggtgcgaagacggcggtgtgatgacaggagcggacgcg
gccaaaatcagtgaccgggccctccaacgcgggcttgggcagatcggcagccttggctcg
ggcaaccacttcctggaagtccaggccgtggaccgcgtctacgatccggttgcggccgcg
ccgatgggtctggcggaagggaccgtctgcgtgatgatccacaccggctcacggggcctg
ggccatcagatctgcacggatcacgtccgccagatggaacaagccatgggccgatacgga
atcgcggtgcccgatcgccaattggcttgtgtgccggtgcactcccccgatgggcaggcc
tatctcgccgcgatggcggcggcggccaactacggacgcgccaaccgccaactgctgacc
gaggcgacgcgtcgtgtgttcgctgatgcaaccggaacacctctggacctgctctacgac
gtgtcgcacaacctggccaagatcgagacgcatccgatcgacggtcagctgcgctcggtg
tgcgtgcaccgcaagggcgccacccgctcgctgccgccgcaccatcacgagctgccggcc
gaactggcagcggtcggccaacccgtgctgatacccgggacgatgggtacggcgtcatat
gtgcttgccggggtcaccggcaacccggcgttcttttccaccgcgcatggtgctgggcgg
gtactgagccgtcaccaggccgcccgccacaccagcggtgaagcgatacgcgccagcctc
gcaaaacgtggcatcatcgtccgcggtacctctcgtaggggtatcgccgaggaaaagccg
gaggcctacaaagacgtcgacgaggtcatcgaagccagccatcagagtggcctcgcgcgc
aaagtggctcgccttgttcccttgggctgtgtcaaaggatga
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