Mycobacterium tuberculosis EAI5: M943_15095
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Entry
M943_15095 CDS
T02749
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mtx
Mycobacterium tuberculosis EAI5
Pathway
mtx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M943_15095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtx03400
]
M943_15095
Enzymes [BR:
mtx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M943_15095
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M943_15095
DNA repair and recombination proteins [BR:
mtx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M943_15095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
DUF5830
Auto_anti-p27
NFACT_N
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AGQ36139
LinkDB
All DBs
Position
complement(3225030..3225899)
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG
KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT
FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS
GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN
GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaagtcgaggtggtgcggcgcggcttgcaggctcacgtgaccggc
cggaccatcaccgaggttcgggtgcaccacccccgcgctgtgcgccgccacgatgccggg
cccgcggatctgacggcgcggctgcggggagcgcggatcaacggaaccgatcggcgcggc
aagtacctgtggttgacactcaatacggctggggtccataggccgacggacaccgcactc
gtggtgcacctgggcatgagtgggcagatgctgctcggggcggtgccgtgtgccgctcac
gtccggatttccgcgctgctcgacgacgggaccgtgctgagcttcgctgaccaacggacc
ttcggagggtggctgcttgccgacctggtgacggtggacggcagcgtggtaccggtgccg
gtcgcccacctggcgcgcgacccgcttgacccgcggttcgattgtgacgctgtagttaaa
gtgttgcggcgcaagcattccgaactcaagcgccagctgctggatcagcgggtggtgtcg
ggaatcggcaacatctatgccgatgaggcgctgtggcgggccaaggtgaacggcgcccac
gtcgccgccacactaaggtgccggcgtctgggagcggtcctgcatgccgccgccgacgtg
atgcgcgaagcgctggcgaaaggtggcacctcgttcgactctttgtatgtcaacgtcaac
ggcgagtcgggctacttcgagcggtcgctggacgcttatggccgcgaaggcgaaaactgt
cggcgctgcggcgcggtgatacgccgggagaggtttatgaaccgctcgtcgttctactgc
ccgcgatgccagccgcggccccgaaagtag
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integrated database retrieval system
