Mycolicibacterium tokaiense: MTOK_01400
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Entry
MTOK_01400 CDS
T06987
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mty
Mycolicibacterium tokaiense
Pathway
mty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTOK_01400 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mty03021
]
MTOK_01400 (rho)
03019 Messenger RNA biogenesis [BR:
mty03019
]
MTOK_01400 (rho)
Transcription machinery [BR:
mty03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MTOK_01400 (rho)
Messenger RNA biogenesis [BR:
mty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTOK_01400 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Fungal_virus_P2_C
VWA_2
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBY84358
LinkDB
All DBs
Position
complement(157582..159588)
Genome browser
AA seq
668 aa
AA seq
DB search
MTDTDLITADSASQTELPGVTADVSAPRGSAAVGSDKSSSSLTSMVLPELRALAARVGVK
GTSGMRKGDLIAAIRERQASVPANGADRPSEAAAPAASAPAADTAPAEAAPAEAPRRRER
RSASRQSGSPAGDTAAEQPKQESKPARADKTERADKTEAKTAEVKAPEAKTAEVKTAELE
AEKAPVQDAPRRQDRGDQQGGEQSNRRDRNNAGQNSGQNEGNRNNDRNESNRNNQNNNNQ
NNDGDDDGEGRGGRRGRRFRDRKRRGERGGGGEGGNDTELRDDDVVQPVAGILDVLDNYA
FVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGAVRVPREGDSNNQNPRQKFNPLVRLD
TVNGGPVDAAKNRPEFGKLTPLYPNQRLRLETGPDKLTTRVIDLIMPIGKGQRALIVSPP
KAGKTTIMQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHT
QAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRF
LGAARNIEHGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDV
NPSGTRKDELLLGPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKTNYEFLVQVSKTA
PGSMDDRD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctgacagcgcatcccagaccgagctgccgggcgtg
actgccgacgtttcggctccccgcggctccgcggctgtcggctccgacaagtccagcagc
tcgctcacctcgatggtgctgcctgagctgcgggctctggctgcccgggtgggcgtcaag
ggcacctcggggatgcgtaaaggcgacctgatcgccgccatccgcgagcgtcaggccagt
gtgccggccaacggcgccgatcgaccgagcgaggctgccgcgccggctgcctccgcccca
gcggctgacaccgcgcccgccgaggccgcgcccgctgaggctccgcggcgccgcgagcgc
cgtagcgcctcccgccagtcgggctcgcccgccggtgacacggccgccgagcagcccaag
caggaatccaagcccgcacgcgccgacaagaccgagcgcgccgacaagaccgaggccaag
accgccgaggtgaaggcccccgaggcgaagaccgccgaggtcaagaccgccgagctcgag
gccgagaaggcccccgttcaggacgctccccgccgacaggaccgcggtgaccagcagggt
ggcgagcagtccaaccgccgcgaccgcaacaatgcgggccagaattcgggccagaacgaa
ggcaaccgcaacaacgaccgcaacgagtcgaaccgcaacaaccagaacaacaacaaccag
aacaacgacggtgacgacgacggcgagggccgcggcggccgccgcggacgtcgcttccgg
gaccgcaagcgccgcggcgaacgcggcggcggtggcgagggtggcaacgacacagaactg
cgcgacgacgatgtcgtccagccggtcgccggcattctcgatgtgctcgacaactacgcc
ttcgtgcggacgtcgggctatctcgccgggccgaacgacgtctacgtctccatgaacatg
gtccgcaagaacggcctgcgccgtggtgatgcggtcaccggtgcggtgcgcgtcccccgc
gagggtgacagcaacaaccagaacccgcggcagaagttcaacccgctggtgcgactggac
acggtcaacggcggcccggtggacgcggccaagaaccgccccgagttcggcaagctgacc
ccgctgtaccccaaccagcggctgcgcctggagaccgggccggacaagctgaccacccgc
gtcatcgacctgatcatgcccatcggcaagggccagcgtgccctgatcgtgtctccgccc
aaggccggtaagaccacgatcatgcaggacattgccaacgccatcacccgcaacaacccc
gagtgccacctgatggtggtgctcgtcgacgagcggcctgaagaggtcaccgacatgcag
cgttcggtcaagggtgaggtcatcgcctccaccttcgaccggccgccgtcagaccacacc
caggctgccgagctggcgatcgagcgggccaagcgcctggtcgagcagggcaaagacgtt
gtggtgcttctcgactcgatcacccgactgggccgtgcgtacaacaacgcatcgccggcg
tcgggccgcatcctgtccggtggtgtggattcgaccgcgctctacccgccgaagcgcttc
ctgggcgccgcccgcaacatcgagcacggcggatcgctcaccatcatcgccaccgcgatg
gtcgagaccggttccaccggtgacacggtgatcttcgaggagttcaagggcaccggcaac
gccgagctcaagctcgatcgcaagatcgccgagcgccgggtgttcccggccgtcgacgtc
aacccgtcgggcacccgcaaggacgagctgctgctcgggccggacgagttcgcgatcgtg
cacaagttgcgccgcgtgctctcggggctggacagccatcaggccatcgatctgctgatg
agccagctgcggaagaccaagacgaactacgagttcctggttcaggtgtccaagaccgcg
cccggttccatggacgaccgcgactag
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