Mycolicibacterium tokaiense: MTOK_02770
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Entry
MTOK_02770 CDS
T06987
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mty
Mycolicibacterium tokaiense
Pathway
mty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTOK_02770 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mty03019
]
MTOK_02770 (deaD)
03009 Ribosome biogenesis [BR:
mty03009
]
MTOK_02770 (deaD)
Enzymes [BR:
mty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTOK_02770 (deaD)
Messenger RNA biogenesis [BR:
mty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTOK_02770 (deaD)
Ribosome biogenesis [BR:
mty03009
]
Prokaryotic type
rRNA helicases
MTOK_02770 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Flavi_DEAD
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBY84495
LinkDB
All DBs
Position
complement(297539..299263)
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AA seq
574 aa
AA seq
DB search
MSTPEPDQPTPSSDAASAPETFADLQIHPAVLEAVSEVGYETPSAIQAATIPALLAGSDV
VGLAQTGTGKTAAFAIPILSKIDTNSRITQALVLAPTRELALQVAEAFSRYGAKLRVNVL
PVYGGSSYVPQIAGLKRGAQIVVGTPGRVIDHLEKGNLDLSHLDYLVLDEADEMLQMGFA
EDVERILSDTPEYKQVALFSATMPPAIKKITSKYLHDPVEVMVKSKTQTAENITQRYLLV
SYPRKMDALTRLLEVEQGDAMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERT
IAQLKDGSIDILVATDVAARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTAFL
FVTPRERHLLGAIERVTRQKLVEIDLPSVEDVNEKRVQKFRDSITDALAKPGIDLFRTLI
EGYERDHDVPMVDIAAALALQSRDGEEFLLTEPPPEKRRERADRPPRPDKPMRRDGGFAT
YRIDVGKRHKVMPGAIVGAIANEGGLHRSDFGHITIKPDFSLVELPPNLPAETLQKLART
RIQGNLINLQPDDGGAPRRSGPPKRDTKKYRKNP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagcactccggaacccgatcagcccaccccgtcctccgacgccgcctcggcgccggag
accttcgctgatctgcagatacacccagcggtcctggaggcggtctccgaggtcggctac
gaaaccccgtccgccatccaggcagccaccatcccggccctgctggcgggctccgacgtg
gtcggattggcgcagaccggcaccggtaagacggccgcgttcgccatccccatcctgagc
aagatcgacaccaacagccgcatcacccaggccctggtactggcccccacccgcgagctg
gcgctgcaggtggccgaggcgttcagccgctacggcgccaagctgcgggtcaacgtgctg
ccggtgtacggcggctcctcttatgtgccgcagatcgccggcctcaagcgcggcgcccag
atcgtggtgggcacccccgggcgtgtcatcgaccacctggagaagggcaacctggacctc
tcgcacctggactacctggtgctcgacgaggccgacgagatgctgcagatgggcttcgcc
gaggacgtcgagcgcatcctgtccgacaccccggagtacaagcaggtggcgctgttctcg
gccaccatgccaccggccatcaagaagatcacgtcgaagtacctgcacgatccggtcgag
gtcatggtcaagtccaagacccagaccgcggagaacatcacgcagcgctacctgctggtg
tcctacccgcgcaagatggacgcgctcacccggctcctcgaggtcgagcagggcgacgcc
atgatcgtcttcgtgcgcaccaagcaggccaccgaggaggtggccgagaagctgcgcgcc
cgcggttttgccgccgccgccatcaacggcgacatcccgcaggccgtgcgtgagcgcacc
atcgcccagctcaaggacggctcgatcgacatcctggtggccaccgatgtggctgcccgc
ggactggacgtcgagcgcatctcgcacgtggtcaacttcgacatcccgcacgacccggag
tcctacgtccaccgcatcgggcgcaccggccgcgccggccgctccggcaccgcgttcctg
ttcgtgacgccgcgggaacgccacctgctgggcgcgatcgaacgggtgacccggcagaaa
ctcgtcgagatcgacctgccgtcggtggaggacgtcaacgagaagcgggtgcagaagttc
cgcgattcgatcaccgatgcactggccaagccggggatcgacctgttccgcaccttgatc
gagggctacgagcgtgatcacgacgtgccgatggtcgacatcgccgcggcgctggcgctg
cagagccgcgacggggaagagttcctgctgaccgagccgccgccggagaagcgccgcgag
cgcgccgaccgcccgccgcggccggacaagccgatgcgccgcgacggtggctttgccacc
taccggatcgacgtcggcaaacggcacaaggtgatgccgggtgccatcgtgggcgccatc
gccaacgaaggcgggctgcaccgcagcgatttcgggcacatcaccatcaagccggacttc
tcgttggtggagttgccgccgaacctgccggccgagacgctgcagaagttggccaggacc
cgcatccagggcaacctgatcaacctgcagcccgatgacggtggcgcgccccgccgttcc
ggacctcccaaacgcgacaccaagaagtaccgcaagaacccatga
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