Mycolicibacterium tokaiense: MTOK_12350
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Entry
MTOK_12350 CDS
T06987
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mty
Mycolicibacterium tokaiense
Pathway
mty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MTOK_12350 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mty03400
]
MTOK_12350 (recB)
Enzymes [BR:
mty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MTOK_12350 (recB)
DNA repair and recombination proteins [BR:
mty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MTOK_12350 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BBY85453
LinkDB
All DBs
Position
complement(1284460..1287774)
Genome browser
AA seq
1104 aa
AA seq
DB search
MTRPFDLLGSLPAPESTTVLEASAGTGKTFVLAGLVTRYLAETDATLDDMLLITFSRAAT
AELRERVREQIVAVVAAFDGADVPRTDLITHLLTAPPDELAVRQARLRTALAEFDSATIA
TTHEFCRLVLTSLGVAGDSDAGVALVEDLGELVREIVDDVYLRRFGGLADTPPLNRDDAL
RLATAVVDKAGTELHPATPEPGSVAHARVEFARDVLVELEVRKRRLGIMHFDDLLSRLAE
ALEPEESPARERMRQRWSIVMIDEFQDTDPVQWQVVDRAFRGHTTLVLIGDPKQSIYAFR
GGDIDAYLDASRTAGEKFTLATNWRSDSALVDSLQAVLGGAALGDPAIVVHHVEAAHSEH
RLAGMPHPAPWRLRVVSRQALGYNKTQSIPIEEARTHIAADMAADIAGTLASGATFDGRA
LRAGDIAVIVESHADARRCQSALAQVGVAAVYTGDSNIFASEAAAEWLALLTAFDQTHRS
ALVRAAAVTSFFGHTVEDLAQQGDTLTDRVAATIRIWTDHARTRGIAAVFEAANVAGMSR
RVLGRRGGQRLMTDLAHVGEMLLDVGHERRFGVPALRDWLREQCTDALPKARVAERNRRL
DSDAAGVQIMTVWASKGLQFPVVHLPFHFNRYVGTADVVTYHDELGRRCTFIGGETARDF
GDAADAARAEDTAERLRLAYVALTRAQSQLVTWWAPTKDEVNAGLSRLLRGRDHGAAEVP
DSCTRGVTDADAQACFAAWSQRGGPVVEESVILGASVLPAVETPTGLGVRHFHRSIDTGW
RRTSYSGLVRAAWAEPGGVGSEPEAGPKDDEVEEIPTTPAATAGAEVISPMDTLPGGTAF
GSLVHAVLETADPDAADLTAELAAEVTRHAAWWGVEATAQEVADALLAVHATPLGPLAPG
LTLRDVPLTDRLSELDFEMPLAGGDVAPSTDAEPTLADMAALVRQHLPAGDPMAVYADRL
SGPLLGAQSLRGYLTGSIDVVLRVHDGDQPRYLVVDYKTNRLGEPGRPLTAADYAPEQLA
AAMLHSDYPLQALLYCVVLHRFLRWRQRGYQPERHLGGVLYLFLRGMCGAATPVFDGHPA
GVFSWQPPAALVLAISDLLDGVRP
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacccggccctttgatctgctgggatcgctgcccgcgccggaatcgacgacggtgctg
gaagccagcgccggaaccggcaagacgttcgtgttggcggggctggtgacgcgctatctc
gccgagaccgacgccactctcgacgacatgctgctgatcaccttcagccgcgcggccacc
gctgagctgcgggagcgggtgcgtgaacagatcgtggccgtggtggccgccttcgacggg
gccgacgtgccgcggaccgacctgatcactcatctgctgaccgcgccacccgacgagctg
gcggtccgtcaggcccggttgcgcaccgccttggcggaattcgactccgccaccatcgcc
accacccacgagttctgccgactggtgctgacctcactgggggtggccggggacagcgac
gccggggtggcgctggtcgaggacctcggcgagctggtccgcgagatcgtcgacgacgta
tacctgcgccgtttcggaggtctggccgacaccccgccgctgaaccgcgatgacgcgctg
cggctggccacggccgtggtggacaaggcgggcaccgaactgcaccctgccacacccgag
ccgggctcggtcgcccacgcccgcgtggagttcgcccgggatgtcctggtggagttggag
gttcgcaagcggcgcctgggcatcatgcacttcgacgacctgctgtcgcggctggccgag
gcgctggaacccgaggaatcccccgcccgggagcggatgcgccaacggtggagcatcgtg
atgatcgacgaattccaggacaccgacccggtgcagtggcaggtggtggaccgggccttt
cgcggccacaccacgctggtgctgatcggcgaccccaagcagtccatctacgcgttccgt
ggcggcgacatcgacgcctacctcgacgcgtcccgcaccgcgggtgagaagttcacgctc
gcgaccaattggcgcagcgacagtgccctggtggacagcctgcaggcagtgttgggtggt
gcggccctgggcgatccggcgatcgtggtccaccacgtcgaggccgcccattcggagcac
cgcctggccggcatgccccaccctgcgccgtggcgcctgcgcgttgtctcgcggcaggcg
ttgggctacaacaaaacccagagcatccccatcgaggaagcgcgcacccacatcgcagcc
gacatggcggccgacatcgccggcacgctggcttccggtgccaccttcgacggccgagcg
ctgcgggccggcgacatcgcggtgatcgtcgagagtcacgccgacgcccgccgctgccag
agtgcgctggcgcaggtcggggtggccgcggtgtacaccggcgactccaacatcttcgcc
tccgaggcggccgcagagtggttggctttgctcaccgcattcgaccagacgcaccgtagt
gccctggtccgggcggcggccgtcacctccttcttcggccacaccgtggaagacctggcg
cagcagggagatacgctgaccgaccgggtggcggccaccatcaggatctggaccgaccac
gcccgcacgcgagggatcgcggcagtgttcgaggctgccaacgtcgccggaatgagccgc
cgggtgctcggccggcgcggcggtcagcggctgatgacggatctggcgcacgtgggcgag
atgttgctcgacgtcggccatgagcgccggttcggtgtccccgccctgcgggactggttg
cgtgagcagtgcaccgacgccttgccgaaggcacgtgtcgccgaacggaaccggcgcctg
gacagcgacgccgccggggttcagatcatgaccgtgtgggccagcaaggggctgcagttc
ccggtggtccatctgccgtttcacttcaaccgctatgtgggtaccgccgatgtggtcacc
taccacgacgagctcggccgccggtgcaccttcatcggcggggagacggcgcgcgacttc
ggcgacgccgccgatgcggcccgggccgaggacaccgcggagcggctacgactggcttat
gtcgccctcacccgcgcccagtcacagctcgtcacctggtgggcacccaccaaagacgag
gtgaacgccggtctgtcccgcttgctgcgcggccgcgaccacggtgccgccgaggtgccc
gacagctgcacccggggggtcaccgatgccgacgcccaggcctgcttcgccgcctggtcg
cagcgcgggggcccggtggtcgaggagtcggtgatcctcggcgcctccgttctcccggct
gtggagacgccaaccggcctgggggtgcggcactttcaccgcagcatcgacaccgggtgg
cggcgcacgtcgtactcggggctggtccgggcggcctgggccgaacccggcggggtggga
agtgagccggaggccggacccaaagacgatgaggtcgaggagattcccaccacaccggct
gcgacagcaggcgccgaggtgatctcgccgatggacaccttgcccggcggcaccgcgttc
ggatcgctggtgcacgcggtgctcgagaccgcggatcccgatgctgcggacctgaccgcc
gaactggccgccgaggtgaccaggcatgcggcgtggtggggtgtggaggccaccgcccag
gaggtggccgacgcgctgctggccgtgcacgccacgccgctggggccactggcgcccggg
ctcaccttgcgcgacgtgccgctgaccgaccggttgagcgagttggatttcgagatgccc
ctggccggtggtgatgtcgcaccctcgaccgacgccgagcccaccttggccgacatggcg
gcgttggtgcgtcagcacctgccggccggggatccgatggccgtgtacgccgatcggctg
tccgggccgctgctcggcgcgcagtcgttgcgcggctatctcaccgggtccatcgacgtg
gtgctgcgggtgcacgacggggaccaaccccgctatctggtggtggactacaagaccaac
cgcctcggggagccgggccggccgttgacggcagccgactacgcccccgagcagctggcc
gcagcgatgctgcattcggactaccccttgcaggcgctactgtattgtgttgttctgcat
cgctttttgcgctggcggcagcgtggctaccagccggagcggcatctgggcggggtgctg
tatctgttcctgcgcgggatgtgcggagccgcgaccccggtattcgacggccatcccgcc
ggggtgttcagctggcagccgcccgcggcactggtgctcgccatctcggatctgctggac
ggggttcggccatga
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