Mycolicibacterium tokaiense: MTOK_27740
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Entry
MTOK_27740 CDS
T06987
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mty
Mycolicibacterium tokaiense
Pathway
mty03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTOK_27740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mty03400
]
MTOK_27740
Enzymes [BR:
mty01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MTOK_27740
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MTOK_27740
DNA repair and recombination proteins [BR:
mty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTOK_27740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
BBY86992
LinkDB
All DBs
Position
2854494..2855357
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AA seq
287 aa
AA seq
DB search
MPELPEVEALADYLRAHAVGLPVGRIDVSAFSVLKTFDPPVTALYGQTVTGAHRWAKYLG
LQVGEWHLITHLSRAGWLRWSDKLAATPLKPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVDDPAKVPGIASLGPDALALGPEELAAVLRGNTGRIKSVITDQKVIAGIGNAYS
DEILHVAKLSPFATAGKLTDAQLGALHDAMISVLTDAVARSVGQQAATLKGEKRSGLRVH
ARTGMPCPVCGDTVREVSFADKSFQYCATCQTGGKVLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactcccagaagtcgaagcgctggccgactacctgcgcgcccacgccgtcggc
ttgccggtgggccggatcgacgtctcggcgttttcggtgctcaagacgttcgacccaccg
gtcaccgctctgtacgggcagaccgtcaccggggcccaccgctgggccaagtacctgggc
ctgcaggtcggggagtggcacctgatcacccacctctcgcgggccggctggctgcgctgg
tcggacaagctggccgcgacaccactgaagccgggcaaaggacccatcgccttgcgggtg
cacctcggaacaccgggggaggcaccgggattcgacctcaccgaggcgggcacccagaag
cggctcgcggtgtggctggtcgatgatcccgcgaaggtgcccggcatcgcctcgctgggg
ccggacgcgctggccctggggcccgaagaactggcagcggtgctgcgcggcaacaccggt
cggatcaaatcggtgatcaccgatcagaaggtgatcgccggaatcggcaacgcctacagc
gacgagatcctgcacgtggccaaactgtcgccgttcgccactgcgggcaaactcaccgac
gcgcagttgggagccctgcacgacgcgatgatctccgtgctgaccgatgccgtcgcccgc
tcggtggggcagcaggccgcaacgctgaagggcgagaagcgttctgggctgcgggtgcac
gcccgcaccggcatgccgtgcccggtgtgtggagacacggtgcgcgaggtctcgttcgcc
gacaagtcctttcagtactgcgcgacgtgtcagaccggcggcaaggtgctggccgaccgg
cggatgtcgaagctgctcaagtga
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