KEGG   Mycolicibacterium tokaiense: MTOK_34530
Entry
MTOK_34530        CDS       T06987                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mty  Mycolicibacterium tokaiense
Brite
KEGG Orthology (KO) [BR:mty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mty03400]
    MTOK_34530
Enzymes [BR:mty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MTOK_34530
    5.6.2.6  RNA 3'-5' helicase
     MTOK_34530
DNA repair and recombination proteins [BR:mty03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MTOK_34530
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_2nd_Lhr WHD_3rd_Lhr Helicase_C ResIII PhoH AAA_25 DUF6406
Other DBs
NCBI-ProteinID: BBY87671
LinkDB
Position
complement(3532439..3536980)
AA seq 1513 aa
MPVTTDPLLRFSPLTRQWFAGTFVEPTPAQAQAWKAIADGDNTLVIAPTGSGKTLAAFLW
AIDQLTGPLDLDRTPGTSVLYVSPLKALAVDVERNLRTPLTGIGRVAEREGSAPPQISVG
VRSGDTTPAKRRELITKPPDILITTPESLFLMLTSAARETLAGVRTVIVDEVHAVANTKR
GAHLALSLERLDALLEKPAQRIGLSATVRPAEEVARFLSGPAPVTIVAPPAAKTFELTVQ
VPVPDMANLENNSIWPDVEERIVDLIETHRSSIVFANSRRLAERLTARLNEIHAERTGVE
LCGERNPGVPGGPPAHIMGSGQSFGAEPVLARAHHGSVSKETRADVEDALKSGRLKAVVA
TSSLELGIDMGSVDLVIQVETPPSVASGLQRIGRAGHQVGEISRGVLFPKHRTDLIGCAV
SVQRMLAGQIETMHVPGNPLDVLAQHTVAACALEPLNADGWFDTVRRSAPFATLPRSAFE
ATLDLLSGKYPSTDFAELRPRVVYDRDTGTVTARPGAQRLAVTSGGAIPDRGLFTVYLAS
SADSEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGEPARLPFWR
GDAVGRPAELGAAVGAFTGELSRMDRTTFEKRCTTIGFNDFAVDNLWRLLDEQKEATGTV
PTDTTLVVERFRDELGDWRVVLHSPYGLRVHGPLALAIGKRLYERFGIDEKPTASDDGII
LRLPDTDETAPGADLFVFDPDEIEPLVTTEVGGSALFASRFRECAARALLLPRRHPGKRS
PLWHQRQRAAQLLDVARKYPDFPIVLEAVRECLQDVYDVPMLTDLMGRIAQRRIKVVEVE
TSMPSPFAASLLFGYVGAFMYEGDSPLAERRAAALSLDSTLLAELLGRVELRELLDADVI
TSTGRQLQHLTPERAVRDAEGLADLLRLLGPLTEDEATERSTADDVGGWLHGLLDAKRVL
RVAFADRTWWVAIEDIGRLRDGVGVAVPVGVPATFTESVKDPLGELLGRYARTHGPFTTV
DAAARFGLGLRVAADVLGRLAVDGKLVRGEFTDAEGEQWCDAEVLRILRRRSLAALRAQV
EPVSTAAYARFLPGWQQLGTASGIDGLAGVIEQLSGVPMPASAVEPLIFGQRVRGYTPAM
LDELLASGEVLWSGAGALAGGDGWVAFHTADTAPLTLTAPSEMDLTDVHTGLLDILGRPG
DAHGAFFFRQLVAGGVSESSLKEALWQLIWAGWITGDTFAPVRALLSGGRRPGARKPATP
THRTRRAPRLSRYSVANPQARTVDATVAGRWSALPAAEQDSTLRAHFSAELLLGRYGVLT
KGSVASENLPGGFATLYKVLSLFEDSGRCQRGYFVESLGGAQFSTASTVDRLRTHADSVD
DQRGERTAVALAATDPANPFGAALPWPVRDAEADTAHRPGRKAGALVVLVDGELAWFLER
GGRSLLSFTADPEALNVAAAALSDLVTQRRVDGLLVERINGAAVLDPGADHAAVSAALTA
AGFSRTPRGLRLR
NT seq 4542 nt   +upstreamnt  +downstreamnt
gtgcccgtcaccaccgacccgctgctccggttcagcccactgacccggcagtggtttgcg
ggcacgttcgtcgagcccaccccggcccaggcgcaggcgtggaaagcgatcgccgacggc
gacaacacgctggtcatcgctcccaccggttccggcaagaccctggcggcgttcctgtgg
gccatcgaccagctgaccggcccgctcgacctcgaccgcacgcccggcaccagcgtgctc
tacgtgtcgcccctcaaagcgctcgccgtcgacgtcgagcgcaacctgcgcacccccctg
accggcatcggccgcgtcgccgaacgggagggttcggcgccgccgcagatcagcgtcggc
gtgcgctcgggcgacaccacacccgccaagcgccgcgaactcatcaccaaaccaccggac
atcctcatcaccacgccggaatcgttgttcctcatgctcacttccgcagccagggagacg
ctggccggagtccgcaccgtgatcgtcgacgaggtgcacgccgtcgccaacaccaagcgc
ggcgcccacctggccctgtcgctggagcgcctcgacgccctgctcgagaaacctgcgcag
cgcatcgggctgtcggccaccgtccgccccgctgaggaggtggcccggttcctctcgggg
cccgccccggtcaccatcgtcgccccgcctgcggccaagaccttcgagctcaccgtccaa
gtgccggtgccggacatggccaacctggagaacaacagcatctggcccgatgtggaagag
cgcatcgtcgacctcatcgagacccaccgttcgtcgatcgtgttcgccaacagtcgccgc
ctcgccgagcgactgaccgcgcggctcaacgagatccacgccgagcgcaccggggtcgaa
ctctgcggtgagcgcaaccccggcgtgcccggcggcccgcccgcccacatcatgggcagc
ggtcagagtttcggggccgagcccgtgctggcccgcgcccaccacggatcggtcagcaag
gagacccgcgccgacgtcgaggacgcgctcaagagcggccgactcaaggccgtggtcgcc
acctccagcctcgagctgggcatcgacatgggctcggtcgacctggtgatccaggtggaa
acgcccccctcggtggccagcggcctgcagcgcatcggccgggcgggccaccaggtgggc
gagatctcccgcggcgtgctgttcccgaagcaccgcacggacctgatcggctgcgcggtg
tcggtgcagcgcatgctggccggtcagatcgagaccatgcacgtaccgggcaatccgctc
gacgtgctggcccagcacaccgtcgcagcctgtgcgctggagccgttgaacgccgacggc
tggttcgacacggtccggcgcagcgcccccttcgcgacactgccgcgcagtgcgttcgaa
gcgaccctggatctgctgtcgggcaagtacccgtccaccgatttcgccgagctccggccg
cgggtggtctatgaccgcgacaccggtaccgtcaccgcccggcccggcgcgcaacgcctc
gccgtcacctccggcggcgccatccccgaccgcggcctgttcaccgtctacctggcctcc
agcgcggactccgaaaagccctcgcgggtgggcgaactcgacgaagagatggtttacgag
tcccggcccggcgacgtcatctccctgggcgccaccagctggcggatcaccgagatcacc
cacgaccgggtgctggtcatccccgcgcccggagagcccgcccggctgccgttctggcgc
ggcgacgcggtgggccggcccgccgagctcggcgccgcagtgggagccttcaccggcgag
ctgtcccggatggaccgcaccaccttcgaaaaacgttgcaccacaattggattcaacgac
ttcgcggtggacaacctgtggcggctgctcgacgagcagaaagaggccacgggtaccgtt
cccaccgacaccacgctggtggtggaacgcttccgcgacgagctgggtgactggcgggtg
gtcctgcactccccctacggcctgcgggtgcacgggcccctggcgctggccatcggcaag
cggctctacgagcggttcggcatcgacgagaagcccaccgcgtccgacgacggcatcatc
ctgcgactgcccgacaccgacgagaccgcacctggggcagacctgttcgtgttcgacccc
gacgagatcgagccgctggtcaccaccgaggtgggcggttcggcgctgttcgcctcccgg
ttccgggagtgcgcggcgcgggcgctgctgctgccacgccgccatcccggcaagcgctcc
ccactgtggcaccagcgtcagcgcgccgcgcagctgctcgatgtggcacgcaagtacccc
gactttcccatcgtgctggaggcggtgcgggagtgcctccaggatgtctacgacgtcccg
atgctgaccgacctgatgggccggatcgcccagcggcgcatcaaggtggtcgaggtcgag
acgtccatgccctcaccgttcgcggcatcgctgctgttcggctacgtcggggccttcatg
tacgaaggcgacagcccgctggccgaacgccgggccgcggccctgtcgctggattccacc
ctgctggccgaactcctgggccgggtcgagttgcgcgaactgctcgatgccgacgtcatc
acctccaccggccgccagctgcagcacctcacccccgagcgggcggtgcgcgacgccgag
ggcctggccgacctgctacgcctgctcggtcccctcaccgaggacgaggccaccgaacgc
agcaccgccgacgatgtgggcggctggctgcacggcctgctcgacgccaagcgggtgctg
cgggtggccttcgccgaccgcacctggtgggtggccatcgaagacatcggccggttgcgc
gacggggtgggtgtcgccgtgccggtcggagtgcccgccaccttcaccgaatcggtcaag
gatcccctgggcgagctgctgggccgttatgcgcgcacccatggaccgttcaccaccgtc
gacgccgcggcgcgattcgggctggggctgcgggtggccgccgatgtgctgggccgcctg
gcggtcgacggcaaactggtgcgcggcgagttcaccgatgccgagggtgagcagtggtgt
gacgccgaggtgctgcgcatcttgcgccgccggtcactggcagcgctgcgggcccaggtc
gagccggtcagcaccgcggcctacgcccggttcctgcccgggtggcaacagctggggacc
gcatcgggcatcgacgggctggccggggtgatcgaacaactctcgggggttccgatgccc
gcgtcggcggtggagccgctgatcttcgggcaacgggtgcgcggctacaccccggcgatg
ctcgacgagctgctggcctccggcgaggtgctgtggtccggcgccggggcgctggccggc
ggtgacggctgggtggcgttccacaccgccgacaccgcgccgctgaccctgaccgcaccc
tcggagatggacctcaccgacgtgcacaccggtctgctggacatcctcggccggcccggt
gacgcgcacggcgccttcttcttccggcaactggtggccggtggtgtgtccgagagttcc
ctcaaagaggcactgtggcaactcatctgggcaggctggatcaccggtgacacctttgcg
ccggtgcgggccctactctcgggcggccgccgacccggggcgcgcaagccggctactccg
acccaccgcacccggcgggcgccgcggctgtcgcgctacagcgtggccaacccgcaggcg
cgcaccgtggacgccacggtggccggccgctggtcggctctgcctgcggccgagcaggat
tcgacgctgcgcgcccatttctccgccgagctgctgctgggtcgctacggggttctgacc
aagggttcggtggcctcggagaatctaccgggcgggttcgccaccctgtacaaggtgctg
tcgctgttcgaagacagcggccgctgccagcgcggctacttcgtcgaatcactgggtgga
gcacagttttcgacggcctccaccgtggacaggctgcgcacccacgccgactcggtcgac
gaccagcgtggcgagcgcactgccgtggccctggcggccaccgacccggccaatccgttc
ggtgccgcgctgccgtggccggtacgcgatgccgaggccgacacggcccaccgtccgggc
cgcaaggccggcgcgctggtggtgctggtcgacggcgagctggcctggttcctggaacgt
ggtggccgctcactgctgagcttcaccgccgaccccgaggcgctcaatgtcgccgccgcg
gcgctgtcggacctggtgacccagcgccgcgtggacggcctgctggtcgaacggatcaac
ggtgcggccgtgctggaccccggcgctgaccacgccgcggtgtccgccgcgctgaccgcg
gcggggttcagccggacgccgcggggcctgcggctgcgctga

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