Mycolicibacterium tokaiense: MTOK_35950
Help
Entry
MTOK_35950 CDS
T06987
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mty
Mycolicibacterium tokaiense
Pathway
mty03420
Nucleotide excision repair
mty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTOK_35950
03430 Mismatch repair
MTOK_35950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mty03400
]
MTOK_35950
Enzymes [BR:
mty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTOK_35950
DNA repair and recombination proteins [BR:
mty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTOK_35950
MMR (mismatch excision repair)
Other MMR factors
MTOK_35950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
HD_4
Motif
Other DBs
NCBI-ProteinID:
BBY87813
LinkDB
All DBs
Position
3681911..3685171
Genome browser
AA seq
1086 aa
AA seq
DB search
MTIVEARYQPAELAAALGLPQPTDEQAAVIASPPGPLVVIAGAGAGKTETMAARVVWLVA
NGYAHPGQVLGLTFTRKAAGQLLRRVRSRLSRLAGTGLAAVESTDPVTVSTYHAFAGTLL
REHGLLLPVEPDSRLLSETELWQLAYDVVCNHPGELDTTKTPAAVTAMVLRLSGQLAEHL
VSTDQLRDTHVELERLVHTLPAAPYQRDRGPSQWLLRLSDAQTDRAELVPLIEALHRRLR
AEKAMDFGMQMAAAARLAAEFPQVGEQLRQRFRVVLLDEYQDTGHAQRVALSGLFGGGAD
DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPFADGTPAPTLELRTSWRNPPTTLRVA
NAISEEARRRSVAVRELRARPDADEGTVRCALLTDVEAERDWVADHIAARYRAAADADMP
PPTAAVLVRRNADAAPMAVALRARGVPVEVVGLAGLLAVDEVADVVAMLRLVADPASGAA
AMRVLTGPRWRLGGADIAALWRRARHLVVASASGGEDLTAIVAQLGPDADAASLADAICD
PGAAEEYSAAGYRRICALGDELTALRSHLGYSVSDLVTEVRRMSGIDVEARAVPTGAEMW
SGSEQLDAFADVVDAYAMRGATGAGNDIAGLLAYLDAAQDVENGLAPAEVTVASDRVQIL
TVHAAKGLEWQVVAVPHLAGRVFPSTAARSTWLTDAGELPPLLRGDRAGLGDHGVPVLDT
SAVANRKQLSDTVIAHRAQLDQRRIDEERRLLYVAITRAEDTLLLSGHHWGATESKPRGP
SEFLVELKDIIDTAAAAGTPCGVIEQWAPAPADGESNPLRDTVIEASWPADPAADRRGAI
EDGAALVLAAMTTDPPAAETPWTAEVDALLAERERTPWQPAAVLPGQLSVSTMVELGRDR
AEALRRLHRRLPVRPDPFALLGTAFHDWVQRFYGAERLFDLADLPGAVDGELAAAEAEQL
ADLQASFMASPWASRTPADVEVPFEMMIGGHVVRGRIDAVFADRDGGITVLDWKTGAPPE
GEQAQRNAAVQLGVYRLAAAALFDVPESEVRAVFHYVRSGRTVAPPLLPGAEELAALISD
DRDASA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtcgaggcgcgctatcagcccgcggaactggcggcggcgctgggacttccg
cagcccaccgacgaacaggccgccgtcatcgcgtcgccacccggaccgctggtggtgatc
gccggtgcgggggcgggcaaaaccgagaccatggccgcccgcgtggtgtggctggtcgcc
aacggatacgcccacccgggccaggtgctcgggctgacgttcacgcgcaaggccgccggc
cagctgctgcggcgggtgcgctcacggctgagccgccttgccggaaccggcttggccgca
gtcgaatccaccgatccggtcaccgtcagcacctaccacgcctttgccgggaccctgctg
cgcgagcacggcttgctgttgccggtggaacccgacagccggctgctctcagagaccgag
ctgtggcagctggcctacgacgtggtgtgcaaccaccccggcgagctggacaccaccaag
actcccgccgccgtcaccgccatggtgctgcggctgtccgggcagctggccgaacacctg
gtcagcaccgaccagctgcgcgacacccacgtcgagctcgaacggctggtgcacaccctg
cccgccgcgccctaccagcgcgaccggggccccagccagtggctgctgcggctgtcggac
gcccagaccgaccgcgccgaactcgtgcccctgatcgaggcgctgcaccggcggctgcgc
gcggagaaagccatggacttcggcatgcagatggctgccgccgcacgattggccgccgag
ttcccgcaggtgggcgagcaactgcggcaacggttccgggtggtcctgctcgacgaatac
caggacaccggacacgcccagcgggtcgcgctgtccgggctgttcggcggcggtgccgac
gacggcctcgccctcacggcggtcggcgacccgatccagtcgatctacggctggcgcggc
gcctcggccaccaacctgccgcggttcaccaccgatttcccgttcgccgacggcaccccg
gcgcccaccctcgaactgcgcaccagctggcgcaacccacccaccaccctgcgggtggcc
aacgccatctccgaggaggcccggcgacgctcggtggcggtgcgggaactgcgggcccgg
cccgacgccgacgagggcaccgtgcgctgtgccctgctcaccgacgtcgaggccgaacgc
gactgggtggccgaccacatcgccgcccgctaccgggcggccgccgatgccgacatgcca
ccgcccactgcggcggtcctggtgcggcgcaacgccgatgccgcgccgatggcggttgcg
ctgcgcgctcgcggcgtccccgtggaggtggtcggcctggcggggctgctggccgtcgac
gaggtcgccgacgtcgtggcgatgctgcggttggtcgcggacccggcgtcgggggctgcg
gccatgcgggtgctgacgggcccgcgctggcggctgggcggggccgacatcgcggcgctc
tggcgccgcgcccggcacctggtggtggcttcggcttccggcggcgaggacctgaccgcg
atcgtcgcgcagttgggccccgacgccgacgcggcctccctggccgatgccatctgtgat
cccggtgctgccgaggagtattcggccgccggctaccggcgcatctgcgcgctcggcgac
gagctgaccgccctgcggtcccacctgggctattcggtgtccgacctggtgaccgaggtg
cgtcggatgtcgggtatcgatgtggaggcccgcgccgtgcccaccggtgccgagatgtgg
tcgggcagcgagcaactggatgccttcgccgatgtggtcgacgcctacgcgatgcggggc
gccaccggcgcaggcaacgacatcgccgggctgctggcgtacctcgacgccgcccaggac
gtcgagaacggcctggcgccggcagaggtgacggtggccagtgaccgggtgcagatcctc
accgtgcacgctgccaaagggctcgagtggcaggtggtcgcggtgccgcacctggccggg
cgggtgttcccgtccaccgcggcgcgcagcacctggctcaccgatgccggagagttgccg
ccgctgctgcgcggtgaccgggccggactgggtgaccacggcgtgccggtgctcgacacc
tcggcggtggccaatcgaaagcagttgtccgacactgtgatcgcgcaccgcgcgcagctc
gatcaacgacgaattgatgaagagcgcaggctcctgtacgtggccatcacccgcgccgag
gatacgctgctgctctccggtcatcactggggtgccaccgagagcaagccgcgcgggccc
tcggagttcctggtcgagctcaaggacatcatcgacaccgcggccgccgccggtacgccg
tgcggggtgatcgaacagtgggcgccggcacctgctgacggcgagagcaatccattgcgc
gacaccgtgatcgaagcctcgtggcccgccgaccccgccgcagaccggcgcggcgccatc
gaggacggggccgcgctggtgttggccgcgatgaccaccgacccacctgcggcggagacg
ccgtggacggcggaggtggacgcactgctggccgaacgtgagcgcacaccgtggcagccc
gccgccgtcctgcccgggcagctgtcggtcagcacgatggtggagctgggccgcgaccgg
gcggaggcgctgcgtcggctgcatcgccgcctgccggtccgccccgacccttttgcgctg
ctgggcacggcctttcacgactgggtgcagcgtttctacggtgctgagcggttgttcgac
ctggccgatctgcccggcgccgtcgacggtgagctggccgcggccgaggccgaacagctg
gccgatctgcaagcgtcgttcatggcttcaccgtgggcgtcgcgcacccccgccgacgtc
gaggtgccgttcgagatgatgatcggcggccacgtcgtccgcggccgcatcgacgcagtg
ttcgccgaccgcgacggcggaatcacggtgctggactggaaaaccggcgcgccgccggag
ggggagcaggcccagcgcaacgccgccgtgcagctcggcgtctaccggctggcggcagcc
gcgctgttcgacgtgccggagtccgaggtccgggcggtgttccactacgtccgcagcggg
cgcaccgtggccccgccgctgctgccgggcgccgaggaactcgccgcgctgatctccgat
gaccgtgatgcgtccgcgtga
DBGET
integrated database retrieval system
