Mycolicibacterium tokaiense: MTOK_41130
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Entry
MTOK_41130 CDS
T06987
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mty
Mycolicibacterium tokaiense
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mty03016
]
MTOK_41130 (truB)
Enzymes [BR:
mty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MTOK_41130 (truB)
Transfer RNA biogenesis [BR:
mty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTOK_41130 (truB)
Prokaryotic type
MTOK_41130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
BBY88331
LinkDB
All DBs
Position
4208016..4208906
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AA seq
296 aa
AA seq
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MTAPPEPGIVVVDKPGGMTSHDVVSRCRRIFGTRKVGHAGTLDPMATGVLVIGIERATKL
LGLVAGESKTYLGTIRLGQSTSTDDAEGEVLQSVPADLLADDQLHAEIAALRGTIEQVPS
TVSAIKVAGKRAYQLARDGETVELAARTVTIDRFDVLDIRRTPGRIDLDVVVDCSSGTYI
RALARDIGAALGVGGHLSALRRTRVGGFGLAQARTLDQLADVPHLSYSLDQACLQAFPRH
DLSDDEAVAVSHGKPLPATGLDGIYAAVAPDGRVMALLRDSGRRTTSVVVIRPSTL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcctccggaacccggcatcgtcgtggtggacaagccgggcgggatgaccagc
cacgacgtggtgagccggtgccggcgcatcttcggtacccgcaaggtggggcacgcggga
acgctggacccgatggccaccggcgtgctggtgatcggaatcgagcgggccaccaagctc
ctggggctggtggccggcgagtccaagacctacctcggcaccatccggctgggtcagtcc
acgtccaccgatgacgccgaaggtgaagtgctgcagtctgttccggcagatctgctcgcc
gacgaccagttgcacgccgagatcgccgcgctgcgcggcaccatcgagcaggtgccatcg
accgtcagcgccatcaaggtggcaggcaaacgcgcctaccaacttgcccgcgacggcgag
acggtggaactggccgcgcggacggtgaccatcgaccggttcgacgtcctcgacatccgg
cgcaccccgggccgcatcgatctggatgtggtggtggactgctcgtcgggcacctacatc
cgcgcgctggcccgcgacatcggtgccgcgctgggcgtcggcgggcacctgagcgccctg
cgccgcacccgggtgggtgggttcggcttggcccaggcccgcacgctggaccagctcgcc
gacgtcccgcacctgagttactcgctggatcaggcgtgcctgcaggcgtttccgcgccac
gatctcagcgatgacgaggcagtggcggtcagtcacggaaagccgttgccggcaacggga
ctcgacgggatctacgccgcggtggctccggacgggcgggtgatggctctgctgcgcgac
agcggccgtcgcaccacgtcggtggtggtcatccggccgtccacgctatag
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