Mycolicibacterium tokaiense: MTOK_42120
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Entry
MTOK_42120 CDS
T06987
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mty
Mycolicibacterium tokaiense
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mty03016
]
MTOK_42120
Enzymes [BR:
mty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MTOK_42120
Transfer RNA biogenesis [BR:
mty03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MTOK_42120
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBY88430
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Position
complement(4300952..4302232)
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AA seq
426 aa
AA seq
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MTDPDPTPEHPDPEDAAPEPLTRPADGVPEVAVTKYDIAAAAELLDGGTGPFAVDAERAS
GFKYSNRAYLIQIRRAGAGTVLIDPVSHGGDSLQVLAPVADVLHTDEWILHAADQDLPCL
AEVGMRPPALYDTELAGRLAGFDRVNLAAMVARLLGLGLAKGHGAADWSKRPLPDDWLNY
AALDVEVLIELRLAVAAVLEEQGKTDWAAQEFDHLRTFEASPTRRDRWRRTSGIHKVRNP
RALAAVRELWTVRDDIARRRDIAPGRVLPDAAIVAAAQADPKTAAELTALPVFGGPKQRR
HAKVWLDALRAARENPEPPTSSEPTNGPPPPVRWSKRKPEAAARLEAARAGLGALSEKVN
VPTENLLSPELVRRLCWDWAPTPDPAATIEEFLQAGAARQWQRELTVPVLTSALAGSDAS
PSEPAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccggaccccacccccgaacaccccgatcccgaggacgcggcacccgaaccg
ctgacccggcccgccgacggcgtgcccgaggtcgcggtgaccaagtacgacatcgccgcg
gccgccgaactactcgacggcggcaccggtccgttcgcggtggacgccgaacgggcgtcg
ggcttcaagtactccaaccgcgcctacctgatccagatccggcgcgccggcgccggaacc
gtgctcatcgacccggtgagccacggcggcgactcgctgcaggtgctggcgccggtggcc
gacgtcctgcacaccgacgaatggatactgcacgccgccgatcaggacctgccgtgcctg
gccgaggtggggatgcgtccccccgcgctctacgacaccgaactggccggccgcctggcg
ggattcgaccgggtgaacctggctgccatggtggcccggttgctcgggctgggcctggcc
aagggccacggtgccgccgactggtccaaacgacccctgccggacgactggctcaactac
gccgcactggatgtcgaggtgctgatcgaactgcgcctggcggtcgccgcggtgctggag
gaacagggcaagaccgactgggccgcacaggaattcgaccacctgcgcaccttcgaggca
tcgcccacccggcgcgaccgctggcggcgcacctccggcatccacaaggtccgcaatccg
cgggcactggcggcggtgcgcgagctgtggacggtgcgcgacgacatcgcccggcgccgc
gacatcgcccccgggcgggtgttgcccgacgcggcgattgtcgctgcggcgcaggcggat
ccgaagaccgccgcagagctcaccgcccttccggtgttcggtggccccaagcagcgcaga
cacgcgaaggtgtggctggacgcgctgcgcgccgcgcgcgagaaccccgaaccgccgacg
tcgagcgagcccaccaacggcccgccgccgcccgtgcggtggagcaaacgcaagcccgag
gctgcggcccggctggaagccgcccgggcggggttgggtgcactgtcggagaaggtgaac
gtgcccaccgagaacctgctgtcgccggagctggtgcgccggctgtgttgggactgggcg
ccgacgcccgacccggccgccaccatcgaggagttcctgcaggccggtgctgcccggcag
tggcagcgcgagctgacggtgccggtgttgacgtccgcccttgcgggcagcgatgcttcg
ccgagcgaacctgcgagctga
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