Mycolicibacterium tokaiense: MTOK_45080
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Entry
MTOK_45080 CDS
T06987
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mty
Mycolicibacterium tokaiense
Pathway
mty03030
DNA replication
mty03430
Mismatch repair
mty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTOK_45080 (dnaE1)
03430 Mismatch repair
MTOK_45080 (dnaE1)
03440 Homologous recombination
MTOK_45080 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mty03032
]
MTOK_45080 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mty03400
]
MTOK_45080 (dnaE1)
Enzymes [BR:
mty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTOK_45080 (dnaE1)
DNA replication proteins [BR:
mty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTOK_45080 (dnaE1)
DNA repair and recombination proteins [BR:
mty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTOK_45080 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBY88726
LinkDB
All DBs
Position
4613762..4617310
Genome browser
AA seq
1182 aa
AA seq
DB search
MGTNDSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATS
AGIKPIIGIEAYIAPASRFDTKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGLRNLFK
LSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHVDEAIAAAAKWQ
EIFGKENFFLELMDHGLDIERRVREGLLEVGKKLGIRPLATNDCHYVTRDASQNHEALLC
IQTGKTLSDPNRFKFDGDGYYLKSAAEMRALWDAQVPGACDSTLLIAERVQPYTDVWAPK
DRMPVFPVPEGHDQGSWLTHEVMTGLSQRRFPGQEVPQEYVDRANYEIKVICDKGFPAYF
LIVADLINYARSVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPD
IDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRI
TKALPPPIMAKDIPVSGITDPNHERYKEAAEVRALIDTDPDVRTIFETARGLEGLVRNAG
VHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI
ENIKANRGEDLDLESLELDDPKAYELLGRGDTLGVFQLDGSAMRDLLRRMQPTEFNDIVA
VLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMFIA
QKVASYSMGKADALRKAMGKKKLEVLEAEYKGFKEGMTNNGFSEAAVKALWDTILPFAGY
AFNKSHAAGYGLVSYWTAYLKANYPGEYMAGLLTSVGDDKDKAAIYLADCRRLGITVLPP
DVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRKEKGNFTDFSDYLNKIDIAACN
KKVTESLIKAGAFDSLKHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGDDDGGTDA
VFTIRVPDEEWEDKHKLALEREMLGLYVSGHPLNGIAHLLAAQVDTQIPAILEGAIPNDT
QVRIGGILASVNRRVNKNGLPWASAQIEDLAGGVEVLFFPQTYSAFGADIADDAVVLVGA
KVAIRDDRISLIANELVVPDFSSAQANRPIAVSLPTRQCTIDKVTALKQVLSRHPGTSQV
HLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccaatgactccttcgtgcatctgcacaaccacaccgaatactcgatgctcgac
ggtgccgcgaaggtcaaacccatgctcgccgaggcgcagcgcctcgagatgcccgccatc
ggcatgaccgaccacggaaacatgttcggcgccagcgagttctacaacgcggccacctcg
gcgggcatcaagccgatcatcggtatcgaggcctacatcgccccggcgtcgcgcttcgac
accaagcgcgtgctctggggggatccgagccagaagtccgatgacgtctccggcagtggt
tcgtacacgcacatgacgatggtcgccgagaacgccaccggtctgcgcaacctgttcaag
ctgtcgtcgctggcctcgttcgagggccagctgggcaagtggtcgcgcatggacgccgag
atcatcgccgagcatgccgagggcatcatcgccaccaccggctgcccgtcgggggaggtg
cagacccggctgcgcctcggtcatgtcgatgaggcaatcgccgcggcggccaagtggcag
gagatcttcggcaaggagaacttcttcctggaactgatggaccatggcctcgacatcgag
cgccgggtccgcgaagggctgctggaggtcggcaagaaactcggcatccggccgctggcc
accaacgactgccactacgtcacccgcgacgcctcccagaaccacgaggcgctgctgtgc
atccagaccggcaagaccctctcggatcccaaccggttcaagttcgacggcgacggctac
tacctgaagtcggcggccgagatgcgggcgctgtgggatgcccaggtgcccggcgcctgt
gattccacgctgctgatcgccgagcgggtgcagccctacaccgatgtgtgggcgcccaag
gaccggatgccggtgttcccggtgcccgaaggccacgaccaggggtcctggctcacccac
gaggtgatgaccgggttgtcccagcgccgcttcccgggccaggaggtaccccaggagtac
gtcgaccgggccaactacgagatcaaggtcatctgcgacaagggtttcccggcctacttc
ctgatcgtggcggacctgatcaactacgcccgctcggtcggcatccgggtgggtccgggc
cgaggttcggcggcgggttcgctggtggcctacgccatgggcatcaccaacatcgacccc
atcccgcacggtctgctgttcgagcggttcctcaacccggaacgcccgtcggctcccgat
atcgacatcgacttcgacgaccgtcgccgcggtgagatgctgcggtatgccgccaacaag
tggggcagtgacagggtggcccaggtcatcaccttcggcaccatcaaaaccaaagcagcg
ctgaaggattcggcgcgggtgcattacggtcagcccggcttcgcgatcgcagaccgcatc
accaaggcgctgccgccgcccatcatggccaaggacatcccggtgtccggcatcaccgat
cccaaccacgagcggtacaaggaagccgccgaggtgcgcgcgctgatcgacaccgatccc
gatgtgcgcaccatcttcgagaccgcccgcgggctcgagggcctggtccgcaacgccggt
gtgcacgcctgtgcggtgatcatgagctccgagccgctgatcgacgccatcccgctgtgg
cgccggccgcaggacggcgctgtcatcaccggctgggactacccgtcgtgtgaggccatc
ggcctgctgaagatggacttcctgggtctgcggaacctgacgatcatcggcgacgcgatc
gagaacatcaaagccaaccgcggtgaagacctggatctggagtcgctggaactcgacgac
cccaaggcctacgaactgttgggccgcggcgacacgctgggggtgttccagctcgacggc
agcgccatgcgggatctgctgcggcgcatgcagcccaccgagttcaatgacatcgtggcg
gtgctggcgctgtaccgccccggccccatgggcatgaacgcccacaacgactacgccgac
cgcaagaacggccgtcagcccatcaagcccatccaccccgagctggaagaaccgctcaag
gagatcctggccgagacctacggcctgatcgtctaccaagagcagatcatgttcatcgcc
cagaaggtcgcctcgtactcgatgggcaaggccgatgcgctgcgcaaggccatgggcaag
aagaagctggaggtcctcgaagccgagtacaagggcttcaaggagggcatgacgaacaac
gggttctccgaggccgcggtgaaagcgttgtgggacaccatccttccgttcgccggttac
gcgttcaacaagtcccacgccgccggctacggcctggtgtcctactggaccgcctacctc
aaggccaactatccgggcgagtacatggcgggcctgctcacctccgtcggcgacgacaag
gacaaggccgccatctacctcgccgactgccggcgcctgggcatcacggtgctgccgccg
gatgtcaacgagtcggtgcagaacttcgcctccgtcggtgacgacatccggttcggcctc
ggcgccgtgcgcaacgtcggagccaatgtggttgcctccctggtgaacacccgcaaggag
aagggcaacttcaccgacttctcggactatttgaacaagatcgacatcgccgcctgcaac
aagaaggtgacggaatcactgatcaaggccggtgcgttcgactccctcaagcacccccgg
aaggggctgttcctggtgcacaccgacgcggttgattccgtgctgggcaccaagaaggcc
gaggccatggggcagttcgatctgttcggtgggggagacgacgacggcggcacggacgcg
gtgttcactatccgggtgcccgacgaggagtgggaggacaagcacaagctcgccctcgag
cgcgagatgctgggtctctacgtctcgggccaccccctcaacggcatcgcccacctgctc
gccgcgcaggtcgacacccagatcccggcgattctggagggtgccatccccaacgacacc
caggtgcgcatcggcggcatcctggcgtcggtgaaccggcgggtgaacaagaacggactg
ccgtgggcgtcggcgcaaatcgaggatctggccggtggggtcgaggtgctgttcttcccg
cagacctattcggcgttcggggcggacatcgccgacgacgcggtggtgctcgtcggcgcc
aaggtcgccatccgggatgaccggatctcgttgatcgccaacgagctggtggtgccggac
ttctcgagtgcccaggcgaaccggccgatcgcggtcagtctgcccacccgccagtgcacc
atcgacaaggtcacggcgctcaagcaggtgctgtcgcgacatccgggcacctcgcaggtg
catctacggttgatcagcggcgagcggatcaccacgctggaattggatcagtcgctgcgg
gtcacgccgtcgtcggcgctgatgggcgacctcaaggcgctgctcggaccgggctgcctg
ggcggctga
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