KEGG   Mycobacterium tuberculosis KZN 605: TBXG_003026
Entry
TBXG_003026       CDS       T02141                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mtz  Mycobacterium tuberculosis KZN 605
Pathway
mtz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mtz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TBXG_003026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtz03400]
    TBXG_003026
Enzymes [BR:mtz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     TBXG_003026
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TBXG_003026
DNA repair and recombination proteins [BR:mtz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TBXG_003026
SSDB
Motif
Pfam: H2TH zf-FPG_IleRS Zn_ribbon_TFIIB Ribosomal_S13 NFACT_N DUF7577 DUF2752
Other DBs
NCBI-ProteinID: AFM50437
LinkDB
Position
complement(3357490..3357972)
AA seq 160 aa
MLVAGTPQPRALGPDALDVSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVA
KISPFATAGKLSGAQLTCLHEAMASVLSDAVRRSVGQGAAMLKGEKRSGLRVHARTGLPC
PVCGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
NT seq 483 nt   +upstreamnt  +downstreamnt
gtgctggtggccgggacgccgcagccgcgcgcgctcgggcccgatgcgctggacgtcagc
accgacgacctggccgggctgttggccggcaacaccggccggatcaagaccgtcatcacc
gaccagaaggtaattgccggcatcggcaacgcctatagtgacgaaatcctgcacgtcgcg
aagatctcgccgttcgccacggccggcaagttatccggcgcacagctcacctgcctgcat
gaggcgatggcgtcggtgctgtcggacgcggtgcgccggtccgtcggccagggcgcggcc
atgctcaaaggggagaaacgttctgggcttcgagtacatgcgcgcaccgggttaccctgc
ccagtgtgcggtgacaccgtgcgggaggtgtccttcgcggacaagtcttttcagtactgt
ccaacgtgtcagaccggtggcaaggcgctggccgaccggcgtatgtcgcggctgctcaag
tag

DBGET integrated database retrieval system