Mycobacterium tuberculosis KZN 605: TBXG_003108
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Entry
TBXG_003108 CDS
T02141
Name
(GenBank) DNA helicase ercc3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mtz
Mycobacterium tuberculosis KZN 605
Pathway
mtz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TBXG_003108
09124 Replication and repair
03420 Nucleotide excision repair
TBXG_003108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtz03021
]
TBXG_003108
03400 DNA repair and recombination proteins [BR:
mtz03400
]
TBXG_003108
Enzymes [BR:
mtz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TBXG_003108
Transcription machinery [BR:
mtz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TBXG_003108
DNA repair and recombination proteins [BR:
mtz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TBXG_003108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Cox20
Motif
Other DBs
NCBI-ProteinID:
AFM50523
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All DBs
Position
3451644..3453272
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AA seq
542 aa
AA seq
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MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV
DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP
MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR
LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL
TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV
FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR
VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA
ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ
EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP
AI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtccgataagacggtgctgttggaagtcgaccatgaactggccggcgctgcacgc
gccgccatcgcgccgttcgccgagctggaacgtgcacccgaacatgtccacacctaccgc
atcacaccgctggcactgtggaatgctcgcgccgccggccatgatgccgagcaagtcgtc
gacgcgctggtcagttactcccgctacgcggtgccgcaacccttgctcgtcgacatcgtc
gacaccatggcccgctacggacgactgcagttggtcaagaacccggcccatggcctgacg
ctggtgagcctggaccgcgcggtgcttgaggaagtgctgcgcaacaagaagatcgcgccg
atgcttggcgcccgcatcgatgacgacaccgtcgtcgtccaccccagcgaacgcggccgg
gtcaagcagctgctgctcaagatcggttggcccgcagaggatctcgccggctacgtcgat
ggtgaagcgcacccgatcagcctgcaccaggagggctggcagctgcgcgattaccagcgg
ctggccgcggactcgttctgggcgggcggctccggggtggtggtgctgccatgtggggcc
ggcaagacgctggtcggtgcggccgcaatggccaaagccggcgcgacgacgttgatcctg
gtcaccaatatcgtcgcggcccggcaatggaaacgagagctggtcgcgcgcacctcgctc
accgagaatgagatcggcgaattctcgggagaacgcaaggaaatccgacctgtcaccatc
tcgacataccagatgatcacccgccgcactaagggcgagtaccgccatctggaactgttc
gacagccgcgactgggggctcatcatctatgacgaggtgcacctgttgccggcaccggtc
ttccggatgaccgctgacctgcagtccaaacggcggctggggctgaccgccacgttgatc
cgtgaagacggacgcgagggcgacgtgttttcccttatcggaccaaagcgctatgacgcg
ccgtggaaggacattgaggcgcagggctggatcgcgccagctgagtgcgtggaagtccgg
gtcacgatgaccgacagcgagcggatgatgtacgccaccgccgaacccgaagaacgctac
cggatctgctcgacggtgcacaccaaaattgctgtggtcaagtcgattctggcgaagcac
ccggatgagcagaccctggtcatcggagcgtacttggatcagctcgacgagctgggcgcc
gagctcggcgctccggtgattcaggggtcgacaaggaccagcgaacgcgaggcactgttc
gacgccttccgccgcggcgaggtcgctacgctcgtggtgtccaaggtggctaacttctcc
atcgacttgccggaagccgccgtggcggtacaggtttcgggaacattcggctcacgccag
gaagaggcgcaacggctcggccggatattgcgacccaaggccgacgggggcggtgccatc
ttctactcggtggtggcccgcgacagcctggatgccgagtacgccgcacaccggcagcgg
tttttagctgagcagggctacggttacatcatccgcgacgccgacgacctgctgggcccg
gcaatttag
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