Mucilaginibacter xinganensis: MuYL_0425
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Entry
MuYL_0425 CDS
T05010
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
muc
Mucilaginibacter xinganensis
Pathway
muc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MuYL_0425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muc03019
]
MuYL_0425
Enzymes [BR:
muc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MuYL_0425
Messenger RNA biogenesis [BR:
muc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MuYL_0425
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
CMS1
AAA_19
Z1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ASU32328
UniProt:
A0A223NRP6
LinkDB
All DBs
Position
complement(435336..436622)
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AA seq
428 aa
AA seq
DB search
MLKTVKLPFPNIFSYLAYLITYKSIVTFKDFNFNEQLFEGIESMGFTTPTPIQEMAIPVI
LNGQDIIACAQTGTGKTGAYLLPVLDIIGKTNKHHTSALILAPTRELAQQIDQQVEGLAY
FTGISSIAVFGGGDGSAYEQQRRGIQNNVNIIIATPGRLIAHLTSGVLKLNHLTHLILDE
ADRMLDMGFSDDIMKIISYLPKTRQTLLFSATMPGRIRSLAKKILNEPEQINIALSQPAV
GIDQQIYRVHDQQKTPLLQMLLKNGSYSSTIIFASRKEIVKALAKELKAAHFKASAFHSD
LEQKEREEILLNFKNKQLPVIIGTDALSRGIDVEGIDLVINYDVPGDPEDYIHRIGRTAR
AETTGTAITFVNHRDERKLKSIEQLIEKPIRLIEVPDELKSIEMVKQEHSTNKRPPQRRW
GNKSRPKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaacggtaaaattgccattccccaacattttttcctaccttgcatacctcatc
acctataaaagtatagtgacattcaaggattttaattttaacgagcaattattcgaaggc
atagaaagtatggggttcaccactccaaccccaatacaggagatggccatcccggttata
ttaaacggacaggacattattgcatgtgcccaaacaggcacggggaaaacaggggcttat
cttttgccggtactggatattattggcaaaaccaataagcaccataccagcgcgcttatt
ttggcgccaacccgcgagctggcccagcagatagatcagcaggtagaaggcctggcttat
tttacgggcattagctctatagctgtatttggtggcggcgatggcagcgcttacgagcaa
cagcgccggggcattcaaaacaatgtaaacattattattgccacaccaggcaggctgata
gcacaccttacttcgggcgttttaaagctgaaccatttaacccatttgattttagacgag
gctgaccgcatgctagacatgggtttctctgacgatattatgaagatcatcagctacctg
cctaaaaccaggcaaacgctgttgttctcggctaccatgccgggccgcatccgctcgctg
gcaaaaaagatcctgaacgaaccggagcagatcaatattgccttgtctcaaccagcagtt
ggaattgaccagcagatctaccgcgtgcacgatcagcaaaaaacgcctctattacaaatg
ctgctcaaaaatggttcgtactccagtaccattatttttgcatcgcgtaaagaaattgta
aaagcgctggcgaaggaattaaaggcggctcattttaaggcaagtgctttccattcagac
ctggaacaaaaggaacgcgaagagatcctgctcaactttaaaaataaacaacttccggtt
atcattggtaccgacgcactttcgcgcgggattgatgtggaagggattgatctggtgatc
aattacgatgttccgggcgaccccgaagattatattcaccgcattggccgtactgcgcgg
gccgaaactactggcacagctataacttttgttaaccatcgtgacgaacgcaagctgaaa
agcattgaacagttgatagaaaaacctatccgcctgatagaagtgcccgatgaactgaag
tcaatcgaaatggttaaacaggagcactccaccaataaaaggccgccacaacggcgctgg
ggtaacaaaagcagaccaaaaaaataa
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