Mucilaginibacter xinganensis: MuYL_0970
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Entry
MuYL_0970 CDS
T05010
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
muc
Mucilaginibacter xinganensis
Pathway
muc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MuYL_0970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muc03019
]
MuYL_0970
03009 Ribosome biogenesis [BR:
muc03009
]
MuYL_0970
Enzymes [BR:
muc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MuYL_0970
Messenger RNA biogenesis [BR:
muc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MuYL_0970
Ribosome biogenesis [BR:
muc03009
]
Prokaryotic type
rRNA helicases
MuYL_0970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASU32870
UniProt:
A0A223NSY4
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All DBs
Position
1047833..1049659
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AA seq
608 aa
AA seq
DB search
MNPFINLGIRHDIVNAISELGFENPTPIQEQSIPVLLTGSNDFVGLAQTGTGKTAAFGLP
LLELLDFEVNYPQALVLCPTRELCLQITNDIKNYSKKMNNVNVVAVYGGASISDQLRQIK
RGVQIVVATPGRMLDIINRKAIDFSQVRFVVLDEADEMLNMGFQEDIDSILSTTPDEKKT
WLFSATMPTEVRRIAKKYMNEPFELTMGTKNTGNANIEHEYYIVRARDKYAAFKRIVDFN
PDIFGIVFCRTKIETQDIAEALLKDGYNADSLHGDLSQQQRDKVMKRYRDRSLQLLIATD
VAARGIDVNDVTHVINYSLPDEVENYTHRSGRTARAGKTGVSISIINAKELGKIRQIERG
LGKKFVKAEIPTGFDVCEKQLFSIVHKIHDVQVNEQQIEQYLPRIMEEFKDLTKEDFIKR
FASIEFNRFLDYYKNAPDLNAPLEEGRRFERDGERAPRGEGAGKSEYTRLFINLGSVDEF
NRGDLLGYICNQSKISGRTVGKIDVKGVYSFFEVPNADVEKVMGGFKEAEFKGRPVRIEI
SGEGSSERREGGGGGYQRREGGYNRERSGGGERREGGYKGGERNASAGGFRDFSGKRRED
RGERKRRF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatttattaatctgggaatccgtcatgatattgttaatgccatctctgagtta
ggatttgaaaatcctacgccaatccaggaacagtcaattccggtattgttaacaggcagc
aacgattttgtcggattagcccaaaccgggaccggtaaaactgctgccttcggactgcca
ctattagaactgctggacttcgaagtaaattatccgcaagcacttgtattgtgcccaaca
cgtgaactctgtttacagatcacgaatgacattaaaaattactccaaaaaaatgaacaac
gttaacgttgttgcagtttatggcggagcaagcatttctgaccaattgcgccagataaaa
cgcggtgtgcaaattgttgttgccacacctggccgtatgcttgacattattaaccgtaaa
gcgattgatttttcgcaggttagatttgttgtattggacgaggctgatgagatgctaaac
atgggcttccaggaagacattgacagtattttatctactactcctgacgagaaaaaaaca
tggctgttttcagccaccatgcctaccgaagttcgccgcatcgcgaaaaagtacatgaac
gagccctttgagcttaccatgggcacaaaaaatacaggtaatgccaatatcgagcatgag
tactacatagtacgtgcccgtgataaatatgctgcttttaaacgtattgttgattttaac
cctgatatttttggtatcgtattttgccgtaccaaaatagaaacccaggatattgcagaa
gcgttgctaaaagacggttacaatgccgattctttacacggtgacctttcgcaacaacaa
cgcgataaggtaatgaaacgctaccgcgaccgcagcctgcaattattaattgctactgac
gtggctgcacgtggtattgacgttaatgacgttacacacgttattaactacagcttgcct
gatgaagttgagaattacacccaccgtagcggacgtacagctcgtgccggtaaaacaggg
gtatcaatctctatcattaatgcaaaagaattaggtaagatccgccagattgagcgcggt
ttaggaaagaaatttgttaaagctgaaataccgaccggttttgatgtttgcgaaaaacaa
ttgttcagcattgtacacaaaatacatgatgtacaggttaacgagcagcagattgagcaa
tacctgccacggataatggaggagtttaaagacttaaccaaagaggattttattaaacgc
tttgcatcaattgagtttaaccgtttccttgattattataaaaatgcacctgatcttaac
gcgccgcttgaagaaggccgtcgttttgaaagagatggtgagcgtgcaccacgtggtgaa
ggcgctggcaaatctgaatatacacgtttgtttataaatctgggctcggttgatgagttt
aaccgcggcgacttgttgggttacatctgcaaccagtcgaaaataagtggccgtactgta
ggtaagatcgatgttaagggtgtttattcgttttttgaagtaccgaatgccgacgttgag
aaggtaatgggtggctttaaagaggccgaatttaaaggtcggccggtacggatagaaata
tccggcgaaggcagcagcgagcgtcgtgaaggcggcggcggtggttaccaacgcagagaa
ggcggctacaaccgcgaaagaagcggcggtggcgaaagacgcgaaggcggttacaaaggc
ggcgaaagaaatgcctctgctggcggtttccgtgacttctccggcaaacgccgtgaagac
cgtggcgaacgcaaaagaagattttaa
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