Mucilaginibacter xinganensis: MuYL_3576
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Entry
MuYL_3576 CDS
T05010
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
muc
Mucilaginibacter xinganensis
Brite
KEGG Orthology (KO) [BR:
muc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
muc03016
]
MuYL_3576
Enzymes [BR:
muc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MuYL_3576
Transfer RNA biogenesis [BR:
muc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MuYL_3576
Prokaryotic type
tRNA splicing ligases
MuYL_3576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ASU35461
UniProt:
A0A223P0U2
LinkDB
All DBs
Position
complement(3799341..3800795)
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AA seq
484 aa
AA seq
DB search
MEKEKIGNNELKALGINDVEVLVNFSRVANGLLKHNVMAKPEMLANLEALIDDPMPYALK
KGGKFKNLAEDVIAMRKEGKFVKQERSNFKLKEEIAEFPVWGLENIEVGALAQMRTAVQL
PIAVAGALMPDAHQGYGLPIGGVLATTANTIIPFAVGVDIACRMCLSIFDLPAEAIDTET
DKLKTILVDNTYFGMGCTTKSYFDSSLFDSKTWGETKLIRTLKDKAYAQLGTSGTGNHFV
EWGELDIAEGALAEIPAGKYLALLSHSGSRGFGGSVADYYSRIAMTKTKLPAEAKHLAWL
DLDKDEGQEYWIAMNLAGEYASANHHEIHNKIARALGVKPISMIENHHNFAWKEQLADGT
EVMAHRKGATPAGEGVLGIIPGSMSTPGFLVRGKGDAASINSASHGAGRAMSRSAAFKTL
DKAVIAANLIDKRITLMGSDMDEAPMAYKDIHTVMAAQNDLVEVLAMFEPRIVRMADARE
RPED
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaaaaaataggcaacaacgagttaaaggcattaggcattaatgatgtggaa
gttttggtaaactttagtcgcgtggctaatggtttgctaaagcacaatgtgatggccaag
ccagagatgctggccaatttggaagccctgattgacgacccgatgccctacgccttaaag
aagggcggcaagtttaaaaacctggccgaagatgtgattgccatgcgtaaagagggcaag
tttgtgaagcaggagcggagcaactttaaactgaaagaagagatagctgagttcccggta
tggggtttggaaaacattgaggtaggtgctttagcgcagatgcgtacagcagttcagtta
cccattgccgttgcaggcgctttaatgcccgatgcgcaccagggttatggtttgcccatt
ggtggcgtgctggctaccacggccaataccattattccgtttgcggtaggggtggacata
gcctgccggatgtgtttaagcatttttgatctgcctgccgaagctattgataccgaaacc
gacaagttgaaaaccattttggtggataacacctatttcgggatgggttgcactaccaaa
tcgtactttgacagttcactgtttgacagtaagacctggggcgaaacaaagctgatccgt
acacttaaagataaagcctatgcgcaattaggtaccagcggtaccggtaaccactttgtg
gaatggggcgaattggatattgccgaaggcgctttggccgagatcccggccggtaagtat
ttggctttactttcacactccggctcccgtggttttggcggtagcgtggccgactattac
agccgtatcgccatgaccaaaaccaagctccctgccgaagccaagcatttagcctggtta
gatctggataaagacgaagggcaggaatactggattgccatgaacctggccggcgaatat
gccagcgccaaccaccacgagatccataacaaaattgcccgggcccttggtgttaagccc
atcagcatgattgaaaatcaccacaattttgcctggaaagagcaactggccgatggtacc
gaggtaatggcacaccgtaaaggcgcaaccccggcaggcgaaggtgtgttaggcattatc
cctggcagcatgagtacacccggctttctggtccgcggtaaaggtgatgcagccagcatc
aactccgctagccacggtgcgggcagggcaatgagccggagtgcggcttttaaaacgtta
gataaagccgttattgccgccaacctgattgataagcgcatcaccctgatgggtagcgat
atggacgaagcgccgatggcttataaggacatacacaccgtaatggcagcgcagaatgat
ctggtagaagtattagccatgtttgagccgaggattgtgagaatggcggatgcgagggag
aggccggaggattga
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