Mucilaginibacter xinganensis: MuYL_4378
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Entry
MuYL_4378 CDS
T05010
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
muc
Mucilaginibacter xinganensis
Pathway
muc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
muc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MuYL_4378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muc03400
]
MuYL_4378
Enzymes [BR:
muc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MuYL_4378
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MuYL_4378
DNA repair and recombination proteins [BR:
muc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MuYL_4378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Ribosomal_S13
Nup54_57_C
Motif
Other DBs
NCBI-ProteinID:
ASU36263
UniProt:
A0A223P2A5
LinkDB
All DBs
Position
complement(4650311..4650979)
Genome browser
AA seq
222 aa
AA seq
DB search
MPENRVRETLEGHTLANVRRVGKELQFEFDNNHVLATHLMLHGQLQLFDKTNSHKFTILE
LLFEGDKGLALTDFQKAATPTLDPEKNETPDALDFDEQYLEDKLSSTKTPVKTVLMDQKV
LRGIGNAYADEILYDAKLSPFSPSNKIPAGKVKQLAKSIKKILEDSEKQILKNNPDIISG
EFRDFMLVHQPKKKQTPAGEIIHQKPVGSRKTYYTDTQELFA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaaaacagggtacgcgaaacattggaaggccatacccttgccaatgtaaggcgg
gtaggtaaggaactgcaatttgaatttgataataatcatgtgctggctacccacctgatg
ctgcacgggcaattgcaattatttgataaaaccaatagccataaattcactatccttgaa
cttttatttgaaggcgataaagggcttgcacttacagattttcagaaggcggctacaccc
acgctcgaccctgaaaaaaatgaaacccccgatgcattggattttgatgagcagtatctt
gaggataaattaagctcaactaaaactcctgttaaaaccgttttaatggatcaaaaagtg
ttgcgtggtattgggaatgcttatgcagatgaaatcctgtacgacgctaagttgtcgccc
ttctctccttcaaacaaaatacccgcaggcaaagtgaagcaattggctaaatcaataaaa
aagatactggaggattcagaaaagcaaatcctaaaaaataaccctgatattataagcggc
gagtttagggattttatgctggtgcatcagccaaaaaagaaacaaaccccggccggcgaa
atcattcatcaaaaacctgtgggttcaaggaaaacttattatacagacacacaggaatta
tttgcttaa
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