Mucilaginibacter sp. KACC 22063: PQ461_15515
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Entry
PQ461_15515 CDS
T11747
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
muci Mucilaginibacter sp. KACC 22063
Brite
KEGG Orthology (KO) [BR:
muci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
muci03016
]
PQ461_15515
Enzymes [BR:
muci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PQ461_15515
Transfer RNA biogenesis [BR:
muci03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PQ461_15515
Prokaryotic type
tRNA splicing ligases
PQ461_15515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WDF54352
LinkDB
All DBs
Position
complement(3592168..3593622)
Genome browser
AA seq
484 aa
AA seq
DB search
MEKEKISNNELKALGINEVDLLVSFSRVANGLLKHHVMSKAEILANLEALVDDPMPYALK
KGGKFKNLAEEVIALRKEGKFIKQERANFKLKEEIADFPVWGLENIEIGALAQMRTAVQL
PIAVAGALMPDAHQGYGLPIGGVLATTANTIIPFAVGVDIACRMCLSIFDLPAAAVDNEK
DKLKNILVDNTYFGMGCTTKSYFDSSLFDSKTWSETKVIRSLKDKAYAQLGTSGTGNHFV
EWGELTIADGAMPGIPAGNYLALLSHSGSRGFGGAVADHYSKIAMTKTKLPAQAKHLAWL
DLDKDEGQEYWIAMNLAGEYASANHHEIHNKIARALGVKPMAMVENHHNFAWKEQLADGT
EVMVHRKGATPAGEGVLGIIPGSMSTPGFLVRGKGDATSINSASHGAGRAMSRSAAFKTL
DRTAIAANLVEKRITLLGSDVDEAPMAYKDINAVMAAQNDLVEVLAKFEPRIVRMANPKE
KPED
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaagatcagcaataacgagttaaaggctttaggtataaacgaggtggac
ttactggtgagctttagccgcgtggctaatggtttactgaagcaccatgtaatgagcaag
gccgaaatactggccaacctggaagccctggttgacgatccgatgccttatgctttgaaa
aaaggcggtaagtttaagaacctggccgaggaggtgattgccctgcgtaaagagggtaag
tttataaaacaggaacgcgctaactttaaactgaaagaagagattgccgatttcccggtg
tggggtttggagaatattgagataggtgcgcttgcacagatgcgtactgccgtacaatta
cccattgccgttgccggcgcattaatgcccgacgcacaccagggctacggcctgcctatc
ggtggtgtgctggccactacggcaaataccattattccgtttgcagttggggtggatatt
gcctgccgtatgtgtttaagcatttttgatttgcctgctgcggctgttgataacgagaaa
gataagctgaagaatatattggtggataacacctatttcgggatgggttgtacaaccaaa
tcttacttcgacagctcgttgtttgacagtaaaacctggagcgaaactaaggtgatccgc
tcgcttaaggataaggcttatgcgcagttaggtaccagcggtacgggtaaccactttgtg
gaatggggcgaactgactattgccgacggcgctatgcccggcataccggcaggtaattac
ctggcgctgctttcgcactccggttcgcgggggtttgggggcgccgtggccgaccattac
agcaaaattgccatgactaaaaccaaactgccggcgcaagccaagcatttggcgtggttg
gatctggataaggatgaagggcaggaatactggatagccatgaacctggctggcgaatat
gccagtgctaaccaccacgagatccacaacaagattgcccgtgccttaggcgttaaacca
atggcgatggtagagaaccaccacaactttgcctggaaagagcaactggccgatggtacc
gaggtaatggtacaccgtaagggtgccaccccggcgggcgagggcgtgttgggtattata
ccgggtagcatgagcacccccgggtttttagtgcgcggtaaaggcgatgcgacaagcatt
aacagcgccagccacggtgcagggcgtgccatgagccgaagcgcagcttttaaaacgcta
gatagaaccgctattgccgccaacctggttgaaaagcgtattaccctgctgggtagcgac
gtggacgaagcgccaatggcctacaaggatattaacgccgtaatggccgcccaaaacgac
ctggtagaagtgttagcgaagtttgaaccgcgaattgtgcgcatggcaaacccaaaagag
aagccggaggattag
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