Mucilaginibacter sp. 21P: INP83_10035
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Entry
INP83_10035 CDS
T11431
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mug Mucilaginibacter sp. 21P
Pathway
mug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INP83_10035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mug03019
]
INP83_10035
03400 DNA repair and recombination proteins [BR:
mug03400
]
INP83_10035
Enzymes [BR:
mug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
INP83_10035
Messenger RNA biogenesis [BR:
mug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
INP83_10035
DNA repair and recombination proteins [BR:
mug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
INP83_10035
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QXV67401
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Position
2198558..2200450
Genome browser
AA seq
630 aa
AA seq
DB search
MTSREILRQYWGHDHFRPMQEEIIASVLQGRDTLALLPTGGGKSVCFQVPALARDGICIV
VSPLIALMKDQVENLIERGINAISIVSGMGRREVDIALDNCIYGSVKFLYLSPERLLSDL
VRERIRYMNVNLFAVDEAHCISQWGYDFRPPYLQLAKLRELHPAVPVLALTATATAEVKQ
DIEDKLDFNNSAVFVKSFERKNLSYVVQDTEDKLRKLIDVATGIQGSGIVYVRSRKETFE
IARHYQRHQISADYYHAGLSADERSEKQSAWKNNNTRIIVATNAFGMGIDKPDVRFVIHK
DIPDSLEAYYQEAGRAGRDEQKAYGVLLYNETDKLRQHKKFLQNFPSIDEIKKVYHNLGN
YCQLAYEAGEGVSFDLDLGEFCSKFELDAIKTLNALKFLEQDEYVSFTESVYLPSRFRFE
VLNEDLYNFQIQNPGWDPFVKTLLRSYGGSFENYVRLKEFDIARRTGMSVQQVIAGMQQL
QAFGLLSYMPQTDKPQITWLKPRQPNNQLYINKAYIGQRKATYLKKLKAVFAYADHEVCR
SQQLLNYFDEEDAPKCGVCDVCLREKRLRNAGEIVDDLTNEIVQLLTMRSHTITDLIPAL
KLGTEREKIQTLRMLLDAGKIKTDGENYYL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacgcgaaatacttagacaatattggggacatgaccacttccggccgatgcag
gaggagatcattgcgtcggtattgcaagggcgtgatacgttggcattactgcctaccggt
ggtggtaagtccgtatgtttccaggtgcctgccttggcaagggatggtatctgtattgtg
gtgtcaccacttatcgcgctgatgaaagatcaggtcgaaaatctgatcgaaagaggaatc
aatgccatatctatcgtttcggggatgggtaggcgtgaagtggacatagccctggataat
tgtatttatggctcggttaaattcctatacttatccccggaacgtttgctgtctgatctg
gtgcgcgaacgcatcagatacatgaacgttaacctgttcgcggttgatgaggcgcattgt
atctcgcagtggggttatgatttcaggccaccttacctgcaactggctaagttgcgagag
ctgcatcctgcagtacctgtactggcccttacagcaactgcaactgcagaagtaaagcag
gatatagaggataagcttgactttaataacagcgctgtattcgttaagagctttgagcgt
aaaaacttgagttacgtggtgcaagacaccgaggacaaactgcgcaagctgatcgacgta
gctaccggcatacaagggagcggaatagtatatgtacgaagtcgtaaagaaacttttgag
atagcgaggcactatcagcgacatcaaatatctgccgattattatcacgccggcctttct
gccgatgagcgctcagagaagcaatcggcctggaaaaataataatacccgcattattgtt
gccaccaacgcctttggaatgggtatagataagccggatgtaaggtttgtgatccataaa
gacatacccgacagcctggaggcttattaccaggaagcggggcgcgcagggcgcgacgag
cagaaagcttatggcgttttactgtataacgaaacggataaattacggcaacataaaaag
tttttacagaattttccctctattgacgaaataaaaaaggtataccataacctgggcaac
tattgccaattggcttacgaagcaggggagggcgttagctttgatcttgacctcggtgag
ttttgcagcaagttcgaattggatgctatcaagaccctcaacgcactaaaattcctggag
caggatgagtacgtttcatttaccgaaagcgtttacctaccctcgcgttttaggtttgag
gtacttaacgaagacctatacaattttcagatacaaaatcctggctgggacccatttgtt
aaaacgctgcttcgttcttacggaggttcgttcgagaactacgtgcggctaaaggagttt
gacatagccaggcgcaccggtatgagtgtgcaacaggtaatcgccgggatgcagcaacta
caggcctttggtttattaagctatatgccacaaacggacaagcctcagatcacgtggtta
aaacctcggcagccaaacaatcaactctacattaacaaggcctatattgggcagcgcaaa
gccacctatcttaaaaagcttaaagcagtatttgcttacgcagaccatgaggtatgccgc
agccaacaactgcttaattactttgacgaagaggatgcaccaaaatgtggcgtttgcgac
gtatgcctgagagaaaagcgtttgcgtaatgccggcgaaattgttgacgacctaactaac
gagatcgtacaattgcttactatgcgttcccataccatcactgatcttatccctgcgctt
aaacttggtaccgagcgcgagaagatccaaaccctccgtatgctgctggatgccggaaag
ataaaaacggatggtgaaaattactatttgtag
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