Mucilaginibacter celer: HYN43_003385
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Entry
HYN43_003385 CDS
T05668
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
muh
Mucilaginibacter celer
Pathway
muh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
muh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYN43_003385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muh03021
]
HYN43_003385
Transcription machinery [BR:
muh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HYN43_003385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_3
HTH_20
HTH_31
HTH_29
HTH_50
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AYL94399
UniProt:
A0A494VKD6
LinkDB
All DBs
Position
830623..831219
Genome browser
AA seq
198 aa
AA seq
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MASVQSLSDFELQQLLVCGNEAAYNELYSRYAAPINRFMQKYLHADTLSEDATHDVFIKI
WNKREQLGNVQSFKSYLFTIARNLALDHLKLAFRTETAISQISATITGYRNTIEEERLTK
EYLLFVENALAALPERSREVFALCREQGKTYDEAAKQLGVSRNAIKNHMVFTMKVLSAKV
ETELGVSLSVLLAVVFKH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtacaatcattatctgattttgaattgcagcaattacttgtttgcggaaat
gaagctgcatataatgaattgtacagtcgctatgcagctccgataaacaggttcatgcaa
aaatatttgcatgccgacacgttaagcgaagatgctacccacgatgtttttattaaaata
tggaataagcgcgagcagcttggtaacgtacaatcatttaaatcgtacctgtttaccata
gcgcggaacctggcgcttgatcatctgaaattagcctttcgtacagaaactgccataagc
cagatctcggctaccattacaggatatcgtaataccatagaagaggagcgccttactaaa
gaatatcttttatttgttgagaacgcgctggctgccctgcccgagcgttcgagggaagtt
tttgcgctttgccgcgaacagggtaaaacttacgatgaagctgccaaacagttgggcgtt
tcacgcaatgccatcaaaaaccatatggtatttaccatgaaggttttgagcgctaaagtt
gaaaccgagcttggtgtttcgcttagtgttttgctcgccgttgttttcaaacattaa
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