Mucilaginibacter celer: HYN43_005840
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Entry
HYN43_005840 CDS
T05668
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
muh
Mucilaginibacter celer
Brite
KEGG Orthology (KO) [BR:
muh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
muh03032
]
HYN43_005840 (topA)
03400 DNA repair and recombination proteins [BR:
muh03400
]
HYN43_005840 (topA)
Enzymes [BR:
muh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYN43_005840 (topA)
DNA replication proteins [BR:
muh03032
]
Prokaryotic type
DNA Topoisomerases
HYN43_005840 (topA)
DNA repair and recombination proteins [BR:
muh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN43_005840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AYL94851
UniProt:
A0A494VMG1
LinkDB
All DBs
Position
complement(1453019..1455412)
Genome browser
AA seq
797 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEGYLGKDFTVKSSYGHIRDLVKSEDAIDIANNFKQKYEVPADK
KQVVSELKKLAKEAEMVWLASDEDREGEAISWHLYETLDLKEVSTKRIVFHEITKPAILK
AIDTPRKIDYNLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVDRER
EINKFKSEAAFKIVAIFGKGKEAFKAELPERFTKQEDAEKFLQDCIAANFDVKSLDTRPT
KRSPAAPFTTSTLQQEASRKLGYSVARTMQVAQRLYESGYITYMRTDSVNLSELALNSAA
SEIVSAYGEKYHQQRRYKTKNASAQEAHEAIRPTYFNNHTIDGESAEKRLYELIWKRAIA
SQMSEAQFEKTTAKISISTRSEDLVANGEVMKFDGFLKVYLESNDDEDDTQQDGENTMLP
PLTQGQRLALQEISATERFSRPPARYTEASLVKKLEELGIGRPSTYAPTISTVQNRGYVV
KEEREGKQRNFRVMTLKAGEIVKETRTENTGAERGKLFPTDIGAVVNDFLVQYFKDIVDF
NFTASVEKQFDEIAQGMKEWTDMLHDFYNPFHKEVESTIEKADKATGERELGIHPENGKK
VSVRIGRFGPFVQVGESASDENEEKPLYASLRSGQSIETISLEEALELFKLPKVVGEYEG
KVMKVAIGRFGPYISHNSAFVSLPKEIDPHDVTEQQAIELIEAKRKKDAEKLIKAFDEDP
DVKVLNGRWGPYIEFGKLNVKIPKDKDPKTLTYEECKALADATPKDAKKGRFGKTAAAAK
PAAAKAPAKKKAPAKKK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaacttacttatagttgaatcaccggcgaaagcgaagaccattgaagggtat
cttggtaaagactttacggtaaagtcgagctacgggcatatccgcgatctggttaaatcg
gaagacgctatagacatagctaataactttaaacaaaagtacgaggtacctgccgataag
aagcaggtagtaagcgaattaaagaagttagctaaggaagccgagatggtttggctcgca
tccgatgaggaccgcgagggagaggccatttcgtggcatttatacgaaactcttgatctg
aaagaggtaagcaccaaacgcatcgtttttcatgagatcaccaaaccggccattttaaaa
gcgatagataccccgcgcaaaatagattacaacctggttaatgcccagcaggcccgccgt
gttttagacaggctggtgggttttgagctttcgcccgttttatggaaaaaggttaaacca
tcactatctgccggccgtgtacaatcggtagcggtacgtttgatagttgacagggagcgc
gagatcaataaatttaaatcggaagcggcatttaaaattgtagccatatttggtaaaggc
aaagaggcttttaaagccgagttgcccgaacgttttaccaaacaggaagatgccgaaaag
tttttgcaggattgcatagcggccaatttcgatgtaaaatcgttagatacccgcccaaca
aaacgctcaccggctgcgccgttcactacctcaaccctgcaacaggaagccagccgcaaa
cttggctattcggttgcacgtaccatgcaggtagcgcagcgtttgtacgaatccggttat
atcacctatatgcgtaccgactcggtaaacctgtcggagcttgccttaaattcggccgcc
agcgagattgtatccgcctacggcgaaaaatatcatcagcaaagaagatataaaaccaaa
aatgcaagcgcccaggaagctcacgaagcaatcaggcctacgtattttaacaaccatact
atcgacggcgaatcggccgagaaacgcctgtacgaactgatctggaagcgggccatcgct
tcgcagatgagtgaagcacagtttgagaaaaccaccgcaaaaatcagcatctcaacacgc
agtgaagatttggttgccaatggtgaagtgatgaaatttgatggcttcctgaaagtgtac
ctcgaatcgaacgatgatgaggacgatacacagcaagacggtgaaaataccatgctccct
cccctaacccagggccagcgcctcgccttgcaggaaatatcggctaccgaacgtttttcg
cgcccgcctgcccgctataccgaggcaagtttggtaaaaaagctggaagagctgggtatc
ggtcgcccgtctacctacgctcctaccatttcaacggttcaaaaccgtgggtacgtggtt
aaagaagagcgtgagggtaaacagcgcaattttagggtaatgacgctgaaagctggcgaa
attgttaaagaaacccgtaccgaaaataccggtgccgagcgcggtaagcttttccctacc
gatattggcgctgtggtaaacgattttttggtacaatactttaaagatattgttgatttt
aacttcacggccagcgttgaaaaacaatttgacgagatagcccagggcatgaaagagtgg
actgatatgctccacgatttttataaccccttccataaagaagttgaaagcactatcgaa
aaagccgataaagccaccggtgagcgcgaattaggcattcaccccgaaaatggcaagaag
gtttcggtacgtataggcaggttcgggccctttgttcaggtaggcgaaagcgcttctgat
gagaatgaagaaaaaccactttatgcaagtttacgcagcgggcaaagtatcgaaaccatc
tcgctggaagaagccctcgaactatttaaactaccaaaagtggttggggagtacgaaggc
aaggtaatgaaagtggccatcggccgttttggcccgtacatcagccataacagcgctttt
gtgtccctgccaaaagagatcgacccgcatgatgtaaccgagcagcaggccatcgaactg
attgaagccaaacgtaaaaaagatgccgaaaagctcattaaagcttttgatgaagatcca
gatgttaaagtactgaacggccgctggggaccatatattgaatttggtaagctgaacgtt
aagataccaaaggataaagaccccaaaacgcttacttacgaagaatgtaaagctttagct
gatgccactcctaaggatgctaaaaaaggccgcttcggcaaaaccgcggcagcagccaaa
ccagccgcagcgaaggctcctgccaagaaaaaggcaccggctaagaagaagtaa
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