Mucilaginibacter celer: HYN43_012730
Help
Entry
HYN43_012730 CDS
T05668
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
muh
Mucilaginibacter celer
Pathway
muh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN43_012730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muh03019
]
HYN43_012730 (pnp)
03016 Transfer RNA biogenesis [BR:
muh03016
]
HYN43_012730 (pnp)
Enzymes [BR:
muh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HYN43_012730 (pnp)
Messenger RNA biogenesis [BR:
muh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYN43_012730 (pnp)
Transfer RNA biogenesis [BR:
muh03016
]
Prokaryotic type
tRNA degradation factors
HYN43_012730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AYL96100
UniProt:
A0A494VRT3
LinkDB
All DBs
Position
complement(3194363..3196504)
Genome browser
AA seq
713 aa
AA seq
DB search
MSLNVIKKVIDLGDGRTIEIETGKLAKQADGSVVVKMGNTMLLATVVSSPEAKEGVDFLP
LSVDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPLFPEDYHADTQVMISLI
SADKDIMPDALAGLAASAALSVSDIPFNGPISEVRVAKIDGQLVINPTLSQLENATLEFI
VAGSEHDINMVEGESKEIQEAELVEAIKFAHAAIKVQCLAQKELTIEVGKTEKRVYSHEH
SNEDLKKAIYAATYDQVYAIASAASAKEERGAKFKEVRDTFIETLGEIDDITKTLAKKYY
HDVEYDAIRNLVLDEGKRLDGRTTTQIRPIWSEVGYLPSAHGSAVFTRGETQSLTSVTLG
GKDDEQMIDGAFINGYQKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKQVLPS
EDENPYTIRVVSDILESNGSSSMATVCAGTLALMDAGVKIKEPVSGIAMGLITNEMGTKY
AILSDILGDEDHLGDMDFKVTGTKNGIVAVQMDLKINGLSYEVLTNALNQAKDGRLHILG
EMAKTITAPREDYKPHAPRIVTIKIDKEFIGAVIGPGGKIIQEMQRETGATISIEEKDNQ
GIVQVFADNKASIDAALGRIRAIASKPEVGEIYEGKVKSIMPFGAFIEIMPGKDGLLHIS
EIDHRRFETMDGIFQIGDEVRVKLLDIDKQGKLKLSRKVLLPKPEKPEQKPNN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaacgtaattaaaaaagttatcgatctgggcgacggacgcactatcgaaatt
gaaacaggtaaactggccaaacaagctgatggctcggtagtagttaaaatgggtaacacc
atgttattggctaccgtggtatcatcgcccgaagcaaaagaaggcgttgactttttgcca
ttatctgttgactaccaggaaaaatacgctgcaacaggccgtatcccgggtggtttttta
cgccgtgaggcccgtttatcagattatgaggttttgatctctcgtttggttgaccgcgct
ttacgtcctttgttccctgaagattatcacgctgatacccaagtgatgatctcattaata
tctgccgataaagatattatgcctgatgcgttggccggtttggcagcatctgcggcttta
tctgtatctgatattccttttaacggccctatctctgaagtacgtgttgctaaaattgac
ggtcagttggtaattaacccaaccttaagccagcttgaaaacgctactttagaatttatt
gtagctggtagcgagcatgatatcaatatggttgaaggcgaatcgaaagaaattcaggaa
gctgaattggttgaggccatcaaatttgcccacgctgctattaaagttcagtgtttagct
caaaaagaactaaccattgaagttggaaaaaccgaaaagcgtgtttacagccacgagcac
agcaacgaggatttgaaaaaagccatctacgctgctacttacgaccaggtttacgctatc
gcttcggctgcttcggcaaaagaagagcgcggtgctaaatttaaagaagtacgtgacact
tttatcgaaactttaggcgagattgacgatatcactaaaactcttgctaaaaaatactac
cacgatgttgagtatgatgctattcgtaacctggtattagacgaaggtaaacgtttagac
ggtcgtaccactacccagatccgcccgatatggagcgaagttggttacctgccatctgct
cacggttcggcggtatttacccgtggcgaaacccaatcattaacttcagttacccttggt
ggtaaagatgatgagcaaatgattgatggtgctttcatcaacggttaccaaaaattcctg
ttgcactacaacttcccgggtttctcaaccggcgaggttaggcctaacaggggtgctggt
cgccgcgaaattggtcacggtaacctggctatgcgttcgttgaaacaagtattgccttct
gaagacgaaaatccatacactatccgtgtggtttctgatatcctggaatcaaacggttca
tcatcaatggctaccgtttgcgcgggtacattagctttgatggatgcaggtgttaaaatt
aaagagccggtatcgggtatcgcgatgggcttgatcaccaacgaaatgggtactaaatat
gctattctttcggatatccttggcgatgaggatcacttaggtgatatggactttaaagta
accggtactaaaaatggtatcgttgctgtacagatggacttgaaaattaacggtctatcg
tacgaagtgttaaccaacgctttaaaccaggctaaagacggtcgtttacatatccttggc
gaaatggctaaaaccattaccgcgccacgtgaggattacaaaccacacgctccacgtatc
gttaccattaaaatcgataaagaatttattggtgcggttattggccccggtggtaaaatc
atccaggaaatgcaacgcgaaaccggtgcgactatctctatcgaagagaaagacaaccag
ggtatcgttcaggtatttgccgataacaaagcttctatcgatgcagctttaggccgtatc
cgtgctatcgcttctaaaccagaagttggcgaaatttacgaaggtaaagtaaaatcgatc
atgcctttcggtgctttcattgagatcatgccaggtaaagatggtttgttacacatctct
gagatagatcaccgcaggttcgaaactatggatggtatcttccagattggtgacgaggta
agggttaaattacttgatattgataagcaaggtaaactgaagctttcaagaaaagtatta
ttgcctaaaccggaaaaaccggagcaaaaaccaaataattaa
DBGET
integrated database retrieval system
