Mucilaginibacter celer: HYN43_018385
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Entry
HYN43_018385 CDS
T05668
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
muh
Mucilaginibacter celer
Pathway
muh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN43_018385 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muh03019
]
HYN43_018385 (rny)
Messenger RNA biogenesis [BR:
muh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYN43_018385 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
UPF0154
Trep_Strep
PFF1_TM
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
AYL97153
UniProt:
A0A494W082
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Position
complement(4526904..4528469)
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AA seq
521 aa
AA seq
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MDILLYVIIGLLLGAIVGVLIGRFLLRKLFKDQEASAQNKVKKILKDAENNAEILKKNKL
LEAKEKFLQMKAEHEQEVNNKNNSINQRENTIKQKEQSLNQRMENLNRKENELDNTRKNL
EKQTEIVVKKQDEVEHLKNQHVQQLETIAGLSAEEAKTQLVDTLREEARTKAMIQIKDIV
DEAKLTATKEAKKIVIQTIQRTATESAIENTVSIFNIENDEIKGRIIGREGRNIRALEAA
TGIEIIVDDTPEAIILSGFDPVRREIARLAMHRLVTDGRIHPARIEEVVAKTKKQIEEEI
VEIGERTVIDLGIHGLHPELIRMVGRMRYRSSYGQNLLQHSREVANFCATMAAELGLNVK
LAKRAGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPEVCNAIGAHHDEIEMTSMLSPI
IQACDAISGARPGARREVVESYIKRLKELEELALSYPGVEKTFAIQAGRELRVVVESEKI
SDAQSEVLAADISNRIQTEMTYPGQIKVTVIRETRSVAFAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacatattactatacgttatcatcggcctgctgttaggcgccattgtcggcgtgctc
ataggccgctttctgctgcgcaagctgtttaaagaccaggaagcctccgcccagaataaa
gttaaaaagatcctgaaagacgctgaaaataatgccgagatcctgaagaaaaataagctt
ctcgaagccaaagagaagtttttgcaaatgaaggctgagcatgagcaggaggtgaacaat
aaaaacaactccatcaatcagcgggaaaacaccatcaagcaaaaagaacaatcgcttaac
cagcgtatggaaaaccttaaccgcaaggagaacgagcttgataatacccgtaagaattta
gagaagcaaaccgaaattgttgttaaaaaacaggatgaggttgagcaccttaaaaaccaa
cacgtacagcaacttgaaaccattgccggtttatctgcggaggaagctaaaacccaattg
gttgatacgctgcgcgaagaagcccgtaccaaagccatgatccagattaaggatattgtg
gatgaggctaagcttaccgctactaaagaagctaagaaaatagttatccaaactatccag
cgtaccgctaccgaaagcgctatcgagaacacggtttctatatttaatattgagaatgat
gagatcaaaggtaggatcatcggccgtgaaggccgtaacatccgtgctttggaggctgct
accggtatcgagatcattgttgatgataccccggaggccattatcctttcgggcttcgac
ccggtaaggcgcgagattgcccgtttggctatgcaccgcctggtgacggacggacggatc
cacccggcccgtattgaggaggtggttgccaaaaccaaaaagcaaattgaagaagaaatt
gttgaaataggtgagcgcaccgtgatcgatcttggcatccatggcttacacccagagctg
atccgtatggttggccgtatgcgttaccgttcatcgtacgggcaaaacctgttacagcac
tcgcgcgaggttgccaatttctgcgcaactatggctgccgagttaggcctcaacgtaaag
cttgctaaacgagccggcttactgcacgatattggtaaagtacctgatgataacccggag
ttaccgcacgctatcttaggtatgcaactggccgaaaaatataaagaacaccctgaagtt
tgtaacgccattggtgcccaccacgatgagatcgagatgacctcgatgctgtcgccgata
atccaggcttgtgatgctatttcgggtgcccgtccgggtgcacgccgtgaggtggttgaa
agctacatcaaacgtttgaaagaactggaagaactggcattgtcatatccgggtgttgaa
aaaactttcgctatccaggctggccgcgagctgcgcgtggtggttgaaagtgaaaagatc
agcgacgcgcaatcagaggtattggctgccgatatttcaaaccgcatccaaaccgagatg
acttatcctggccaaattaaggttaccgtgatcagggaaacccgttcggtagcgtttgcc
aagtaa
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