Mesitornis unicolor (brown roatelo): 104533199
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Entry
104533199 CDS
T08455
Symbol
SKIV2L2
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104533199 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104533199 (SKIV2L2)
03041 Spliceosome [BR:
mui03041
]
104533199 (SKIV2L2)
03009 Ribosome biogenesis [BR:
mui03009
]
104533199 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
mui03016
]
104533199 (SKIV2L2)
Enzymes [BR:
mui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104533199 (SKIV2L2)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
104533199 (SKIV2L2)
Spliceosome [BR:
mui03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104533199 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
104533199 (SKIV2L2)
Ribosome biogenesis [BR:
mui03009
]
Eukaryotic type
Pre-60S particles
Helicases
104533199 (SKIV2L2)
Transfer RNA biogenesis [BR:
mui03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
104533199 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
MTR4-like_stalk
MTR4_beta-barrel
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
104533199
NCBI-ProteinID:
XP_010190229
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
RRSEEKSSITAPGKSKREFDVISAEGAVLGKKPKLEDVVSEDANLADLMPQVKVQAVETV
EDCTHEVALPADEDFTGLKPRTGKAAKEYPFILDAFQREAILCVDNNQSVLVSAHTSAGK
TVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVM
TTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIP
NARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAM
QVLRDAGDLAKGDQKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMT
KLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETI
EILFSEGLIKALFATETFAMGINMPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRR
GMDDRGIVILMVDEKMSPTIGKHLLKGSADPLNSAFHLTYNMVLNLLRVEDINPEYMLEK
SFYQFQHYRTIPEIVERVNNLEGQYNKISIPNEENVVIYYKIRQQLAKLGKEIEEYIHKP
KYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVK
NT seq
1912 nt
NT seq
+upstream
nt +downstream
nt
gagacgatcagaggaaaaatcttccataactgcaccagggaagtccaaaagggaatttga
cgtcattagtgcggaaggtgctgttttgggaaagaagccaaaattggaagatgttgtatc
agaagacgctaacctggcagacctgatgcctcaagtaaaagtgcaagctgtggagactgt
tgaagattgcacacatgaggttgcacttcctgcagatgaagacttcacaggtctgaagcc
aagaactggaaaagctgcaaaagaatatccatttattcttgatgcctttcagagagaagc
tattctttgtgtagataataaccagtctgtattagtgtcagctcatacatcagctggtaa
aactgtttgtgcagagtacgcaattgccctggctttgagggagaaacagcgtgtgatatt
tacgagtccaattaaagctttgagtaatcagaagtaccgtgagatgtatgaagaatttca
ggatgttggtttgatgactggggatgtcaccattaatcctacagcttcttgtttggtcat
gacaaccgagattttgagaagtatgctctacagaggttctgaggttatgcgagaagtcgc
atgggttatttttgatgaaatccactacatgagagattcagaacgtggtgtggtttggga
agagacaattattttgctccctgacaatgttcattatgtgttcctttctgcaactattcc
aaatgcccgtcagtttgctgaatggatctgccaccttcacaaacagccttgccatgtgat
ttacacagactatcgacccactccactgcagcattatatattcccagcaggaggagatgg
actccatctggttgttgatgaaaatggagatttcagagaagataattttaatacagcaat
gcaagtgcttagagatgcaggagacttagcaaaaggggaccagaaagggagaaaaggagg
aacaaaaggtccttcaaatgtttttaagattgtaaagatgatcatggaaaggaatttcca
acctgtgattatattcagcttcagtaagaaggactgtgaagcgtatgcacttcagatgac
aaagttagattttaatacagatgaagaaaaaaagatggttgaagaagtgttcaataatgc
aattgattgtctatcagatgaagacaaaaaacttcctcaggtggagcatgtacttcctct
tctgaagcgaggaattggtatccatcatggtggtctgcttcctatcttaaaagaaaccat
agaaattcttttctctgagggcctaataaaggccttatttgcaacagagacttttgctat
gggaattaatatgccagccaggactgtgctatttacgagtgccagcaaatttgatggaaa
ggatttccgatggatatcctcaggtgagtacattcaaatgtcaggtcgtgcaggacgccg
aggtatggatgacagaggaatagtaattcttatggtggatgaaaaaatgagtccaacaat
tggcaagcatcttttgaagggttcagctgatcctttaaacagtgcattccacctgacgta
caacatggtattgaacttgcttcgagtagaggatattaaccctgaatacatgttagaaaa
atccttctatcaattccaacattacagaactattccagaaatagtagaaagagtgaataa
tctggaaggacagtacaacaaaatatcaatccccaatgaagaaaatgtggtgatatacta
caaaattcgacagcagcttgcaaaactgggtaaagagattgaagaatatattcacaaacc
aaagtattgcttgccctttctacagccaggaagactggtaaaggtgaagaatgaaggtga
tgactttggatggggagtggtcgttaatttctctaagaaatccaatgttaag
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