Mesitornis unicolor (brown roatelo): 104534144
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Entry
104534144 CDS
T08455
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104534144 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104534144 (CPSF2)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104534144 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104534144 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104534144
NCBI-ProteinID:
XP_010184704
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDSE
MQVDVPSSDSSVIAQQKAMKSLFGDDDKEICEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgacaacactttcaggggtgcaggaggagtctgccctttgc
tatctgttgcaagtagatgaatttcgttttcttttggactgtggctgggatgagaacttt
tctatggatattattgattctctgaggaaacatgtacaccaggttgatgctgttcttctt
tctcatcctgaccctctacatcttggtgctcttccatatgcagttggaaaaatgggattg
aattgtgctatttatgcaactattcctgtatataagatgggacagatgtttatgtacgat
ctctaccagtcccgccataataccgaagatttcacactctttacgttggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaatttgaaaggcaaa
ggacatggtttgtcaatcacaccgttgccagctggccacatgatagggggcacaatttgg
aagattgtcaaggatggagaggaagaaattgtttatgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaatgctacttatgtacaacccaggaggaagcaaagggatgaacagctactg
actaatgttttggagacattacgaggggatggaaatgtgttaatagcagtggatacagca
ggcagagttctggaacttgctcaacttctcgatcagatctggagaacgaaagatgcagga
ttaggagtctactctctagcacttttgaataacgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaggacaagagaaac
aatccttttcagttccgccatctctccttgtgtcatagtctgtctgatctggcccgagtg
cctagtccaaaagttgttcttgccagtcaacctgacttagagtgtggattttctcgagat
cttttcattcagtggtgccaggattcaaaaaactctataattttaacttatcgcactact
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaggaacttgaagaatacctggaaaaggagaaa
ctaaagaaagaagcagctaagaagttagaacagtctaaagaggcagatattgattccagt
gatgagagtgatgctgaagaagatattgatcagccaactgtacataagaccaaacatgat
ttgatgatgaaaggtgaaggtagccggaaagggagcttcttcaaacaggcaaagaaatct
tatccaatgtttccagcccctgaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggatttgtcagacgttcctacc
aaatgtatttctgcaacagaatccatggaaattaaagccagagttacatacattgactat
gaaggacgctcagatggggactcaattaaaaaaataattaaccaaatgaaaccaagacaa
ctggtcattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagatattaaagtttacatgccaaaactgcatgaaactgtagatgcaacc
agcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctcccttcagttc
tgcaaagccaaggatgctgagctggcttggatagatggtgttctggacatgcgggtttca
aaagtggatactggagttattttggaagagggggagctgagggaagatgaagattcagag
atgcaagtggatgtgccttcttcagactccagtgtcattgcacagcagaaggccatgaaa
agtctcttcggtgacgatgacaaggagatatgtgaggagagcgagatcattcctactttg
gaacctctgccacctcatgaggttcttggacatcagtctgtgtttatgaatgagccgagg
ctgtctgacttcaagcaagttctcctgcgtgaaggtatacaagctgaatttgtaggagga
gtgcttgtgtgcaacaacctggtggctgttcgcaggactgaaacagggcgcattggattg
gaaggctgtctctgtcaggacttctataggataagagaccttttatacgagcaatacgct
attgtctaa
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